RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 LMF2Q9BU23 707 aaKnown RBP9.26□□□□□ -0.93
COPB1-201ENST00000249923 KRCC1Q9NPI7 259 aaPredicted RBP9.26□□□□□ -0.93
COPB1-201ENST00000249923 HRASLS2Q9NWW9 162 aa9.26□□□□□ -0.93
COPB1-201ENST00000249923 MGAT4CQ9UBM8 478 aa9.26□□□□□ -0.93
COPB1-201ENST00000249923 NUP210LQ5VU65 1888 aa9.26□□□□□ -0.93
COPB1-201ENST00000249923 A0A1B0GVT2 93 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 C17orf51A8MQB3 221 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 OIP5O43482 229 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 APBB3O95704 486 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 LIPCP11150 499 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 CD53P19397 219 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 RAB3BP20337 219 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 GDI2P50395 445 aaKnown RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 BTG2P78543 158 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 CDONQ4KMG0 1287 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 Q6ZSR6 202 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 TEX19Q8NA77 164 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 AVL9Q8NBF6 648 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 MYEF2Q9P2K5 600 aaKnown RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 FBXL3Q9UKT7 428 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 MAB21L2Q9Y586 359 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 IER3IP1Q9Y5U9 82 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 UBL4AP11441 157 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 TYRP1P17643 537 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 HNRNPA2B1P22626 353 aaKnown RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 ZP1P60852 638 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 GGTLC2Q14390 218 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 LINC01590Q5TEZ4 76 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 OTPQ5XKR4 325 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 RPL13AP3Q6NVV1 102 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 ZCCHC12Q6PEW1 402 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 RTL4Q6ZR62 310 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 GPALPP1Q8IXQ4 340 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 TNFAIP8L1Q8WVP5 186 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 SLC25A38Q96DW6 304 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 SEC22CQ9BRL7 303 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 S1PR5Q9H228 398 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 HEXA-AS1Q9H8Q6 139 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 SCML1Q9UN30 329 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 KLHDC2Q9Y2U9 406 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 PCDHGA9Q9Y5G4 932 aaKnown RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 A0A0A6YYC8 382 aaPredicted RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 TCRBV16S1A1N1A0A5B0 115 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 I3L1I5 382 aaPredicted RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 RAD1O60671 282 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 IGHV4-34P06331 123 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 NUP62P37198 522 aaPredicted RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 ZNF684Q5T5D7 378 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 FAM199XQ6PEV8 388 aaPredicted RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 SEZ6L2Q6UXD5 910 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 TPRA1Q86W33 373 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 RPLP0P6Q8NHW5 317 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 RPS4Y2Q8TD47 263 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 GPBAR1Q8TDU6 330 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 RERGQ96A58 199 aaPredicted RBP9.25□□□□□ -0.93
COPB1-201ENST00000249923 TSSK2Q96PF2 358 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 NMNAT2Q9BZQ4 307 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 SEMA4CQ9C0C4 833 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.25□□□□□ -0.932e-11■■■■□ 22.6
COPB1-201ENST00000249923 POT1Q9NUX5 634 aa9.25□□□□□ -0.93
COPB1-201ENST00000249923 THADAQ6YHU6 1953 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 DCTN6O00399 190 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 TCRBP04435 133 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 SLC35E2P0CK97 266 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ADH7P40394 386 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 BTG1P62324 171 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 RPS4XP62701 263 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 PLA2G7Q13093 441 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 EIF2B5Q13144 721 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 KLF9Q13886 244 aaPredicted RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 SHHQ15465 462 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 GRK1Q15835 563 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 POMZP3Q6PJE2 187 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ZNF782Q6ZMW2 699 aaPredicted RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 TMED4Q7Z7H5 227 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 MOSPD2Q8NHP6 518 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 LGALS14Q8TCE9 139 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 TMEM27Q9HBJ8 222 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 TRAV1-2A0A0B4J238 106 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 A0A0J9YY10 115 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ACOD1A6NK06 481 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ARPC1BO15143 372 aaKnown RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 GMDSO60547 372 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 FBXO45P0C2W1 286 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 MAOAP21397 527 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 VEGFCP49767 419 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 MMP15P51511 669 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 PGDP52209 483 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 RAB38P57729 211 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 SIRPAP78324 504 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ST3GAL2Q16842 350 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 ZBTB37Q5TC79 503 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 TRAF4Q9BUZ4 470 aaPredicted RBP9.24□□□□□ -0.93
COPB1-201ENST00000249923 RTN4RQ9BZR6 473 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 PCNX3Q9H6A9 2034 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 LOC105371267A0A1B0GV96 52 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 URADA6NGE7 173 aa9.24□□□□□ -0.93
COPB1-201ENST00000249923 C2orf74A8MZ97 194 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms