RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SNX4O95219 450 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 CCL4P13236 92 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 CAPZA2P47755 286 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 SLC25A1P53007 311 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 TAS2R43P59537 309 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 OR5M10Q6IEU7 315 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 FAM199XQ6PEV8 388 aaPredicted RBP16.76■□□□□ 0.27
HOXC11-201ENST00000243082 LYPD4Q6UWN0 246 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 GRINAQ7Z429 371 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 SLC22A16Q86VW1 577 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 NLGN4YQ8NFZ3 816 aaPredicted RBP16.76■□□□□ 0.27
HOXC11-201ENST00000243082 OR5L2Q8NGL0 311 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 ABCB9Q9NP78 766 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 RPRD1BQ9NQG5 326 aaKnown RBP16.76■□□□□ 0.27
HOXC11-201ENST00000243082 RXFP3Q9NSD7 469 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 TAS2R5Q9NYW4 299 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 COPS3Q9UNS2 423 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 PCDHGB7Q9Y5F8 929 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 EXPH5Q8NEV8 1989 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 ANKRD33BA6NCL7 494 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 SLC25A12O75746 678 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 PYCR1P32322 319 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 CDONQ4KMG0 1287 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 TP53I3Q53FA7 332 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 EMC4Q5J8M3 183 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 DMKNQ6E0U4 476 aaPredicted RBP16.75■□□□□ 0.27
HOXC11-201ENST00000243082 OR6K6Q8NGW6 343 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 RNF138Q8WVD3 245 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 TMCO6Q96DC7 493 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 PGLYRP3Q96LB9 341 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 TSSK2Q96PF2 358 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 ALG12Q9BV10 488 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 GRHPRQ9UBQ7 328 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 ST6GALNAC2Q9UJ37 374 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 TRAPPC4Q9Y296 219 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 GRIP1Q9Y3R0 1128 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 FUOMA2VDF0 154 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 TMEM221A6NGB7 291 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 FAM171A2A8MVW0 826 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 M0R296 226 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 CYC1P08574 325 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 NAGAP17050 411 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 SLC3A1Q07837 685 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 MESTQ5EB52 335 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 SYS1Q8N2H4 156 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 CCDC86Q9H6F5 360 aaKnown RBP16.75■□□□□ 0.27
HOXC11-201ENST00000243082 WDR54Q9H977 334 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 GALNT9Q9HCQ5 603 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 RHBDL2Q9NX52 303 aa16.75■□□□□ 0.27
HOXC11-201ENST00000243082 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
HOXC11-201ENST00000243082 ZNF346Q9UL40 294 aaKnown RBP16.75■□□□□ 0.27
HOXC11-201ENST00000243082 A8MVM7 634 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ZFAND5O76080 213 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 MT-ATP6P00846 226 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ACTA2P62736 377 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ACTG2P63267 376 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 MC2RQ01718 297 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 C17orf67Q0P5P2 114 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 LYPD8Q6UX82 237 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 MAMDC2Q7Z304 686 aaPredicted RBP16.74■□□□□ 0.27
HOXC11-201ENST00000243082 GALNT6Q8NCL4 622 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ZBTB44Q8NCP5 570 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 AP3S1Q92572 193 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 PMEPA1Q969W9 287 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 PELI1Q96FA3 418 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 NPAS1Q99742 590 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 PPIL3Q9H2H8 161 aaKnown RBP16.74■□□□□ 0.27
HOXC11-201ENST00000243082 KCNN2Q9H2S1 579 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 MYOTQ9UBF9 498 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 CFAP54Q96N23 3096 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 WDFY3Q8IZQ1 3526 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ANKUB1A6NFN9 424 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 DCTN6O00399 190 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 SC5DO75845 299 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 NCR1O76036 304 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 F8A1P23610 371 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ACVR1BP36896 505 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 KRR1Q13601 381 aaKnown RBP16.74■□□□□ 0.27
HOXC11-201ENST00000243082 FAM69AQ5T7M9 428 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 C1orf140Q5VVS0 124 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 GPR139Q6DWJ6 353 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 TCEAL6Q6IPX3 200 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 ABHD4Q8TB40 342 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 SNRNP27Q8WVK2 155 aaKnown RBP16.74■□□□□ 0.27
HOXC11-201ENST00000243082 TTC9Q92623 222 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 TCEAL3Q969E4 200 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 SLC25A36Q96CQ1 311 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 CCDC32Q9BV29 185 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 NDEL1Q9GZM8 345 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 RNF32Q9H0A6 362 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
HOXC11-201ENST00000243082 OGG1O15527 345 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 BCAP31P51572 246 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 TRAM1Q15629 374 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 ZNF79Q15937 498 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 SGCBQ16585 318 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 ZMAT1Q5H9K5 638 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 BICRALQ6AI39 1079 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 ZNF511Q8NB15 262 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 STK35Q8TDR2 534 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms