RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SCN1BQ07699 218 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 SELENBP1Q13228 472 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 P2RY14Q15391 338 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 NKAIN1Q4KMZ8 207 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 CCDC58Q4VC31 144 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 ACSM3Q53FZ2 586 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 RPL22L1Q6P5R6 122 aaKnown RBP17.38■□□□□ 0.37
YBX3-201ENST00000228251 SHISA6Q6ZSJ9 500 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 GHDCQ8N2G8 530 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 OR13C5Q8NGS8 318 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 GPR119Q8TDV5 335 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 RNF138Q8WVD3 245 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 RNF31Q96EP0 1072 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 TTYH2Q9BSA4 534 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 TTTY10Q9BZA0 68 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 TBL1XR1Q9BZK7 514 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 ZCCHC4Q9H5U6 513 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 MOKQ9UQ07 419 aa17.38■□□□□ 0.37
YBX3-201ENST00000228251 TRAV36DV7A0A075B6V5 113 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 TRAV1-2A0A0B4J238 106 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 CPED1A4D0V7 1026 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 VSTM2BA6NLU5 285 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 PLA2G10O15496 165 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 ZNF354AO60765 605 aaPredicted RBP17.37■□□□□ 0.37
YBX3-201ENST00000228251 GDI2P50395 445 aaKnown RBP17.37■□□□□ 0.37
YBX3-201ENST00000228251 P2RX1P51575 399 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 GBX2P52951 348 aaPredicted RBP17.37■□□□□ 0.37
YBX3-201ENST00000228251 HLA-BQ31612 363 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 C1QL3Q5VWW1 255 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 PEAR1Q5VY43 1037 aaPredicted RBP17.37■□□□□ 0.37
YBX3-201ENST00000228251 TRILQ7L0X0 811 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 NANOGNBQ7Z5D8 188 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 TIGD4Q8IY51 512 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 C10orf53Q8N6V4 93 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 OR6C1Q96RD1 312 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 WDR77Q9BQA1 342 aaPredicted RBP17.37■□□□□ 0.37
YBX3-201ENST00000228251 RPRD1BQ9NQG5 326 aaKnown RBP17.37■□□□□ 0.37
YBX3-201ENST00000228251 FSCN3Q9NQT6 498 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 ACOXLQ9NUZ1 547 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 TAS2R5Q9NYW4 299 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 SUSD2Q9UGT4 822 aa17.37■□□□□ 0.37
YBX3-201ENST00000228251 IDSB3KWA1 339 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 DCTN6O00399 190 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 SLC19A2O60779 497 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 F13BP05160 661 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 RPS5P46782 204 aaKnown RBP17.36■□□□□ 0.37
YBX3-201ENST00000228251 PWWP2BQ6NUJ5 590 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 SFXN4Q6P4A7 337 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 UNQ9370/PRO34162Q6UXP9 181 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 HPS1Q92902 700 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 TSSK2Q96PF2 358 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 DEPDC7Q96QD5 511 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 MARCH7Q9H992 704 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 B3GAT2Q9NPZ5 323 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 SACM1LQ9NTJ5 587 aa17.36■□□□□ 0.37
YBX3-201ENST00000228251 TMEM200CA6NKL6 621 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 B4DXG7 233 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 UCHL1P09936 223 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 GP1BBP13224 206 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 ELK1P19419 428 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 CXCR1P25024 350 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 DLX5P56178 289 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 OR10A3P58181 314 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 CBFBQ13951 182 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 QPRTQ15274 297 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 PYDC2Q56P42 97 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 GPR139Q6DWJ6 353 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 SLC16A9Q7RTY1 509 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 JAZF1Q86VZ6 243 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 ADGRG3Q86Y34 549 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 EGFL6Q8IUX8 553 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 OR6K6Q8NGW6 343 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 NUBPLQ8TB37 319 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 C11orf54Q9H0W9 315 aaPredicted RBP17.35■□□□□ 0.37
YBX3-201ENST00000228251 CYSLTR2Q9NS75 346 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 A0A1W2PRG6 482 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 MT-ATP6P00846 226 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 SERPINA3P01011 423 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 PDGFBP01127 241 aaPredicted RBP17.35■□□□□ 0.37
YBX3-201ENST00000228251 MYL9P24844 172 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 CASP3P42574 277 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 POLR2HP52434 150 aaKnown RBP17.35■□□□□ 0.37
YBX3-201ENST00000228251 TAB1Q15750 504 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 CEP78Q5JTW2 689 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 PAMR1Q6UXH9 720 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 OVCH1Q7RTY7 1134 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 ZNF511Q8NB15 262 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 SNX33Q8WV41 574 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 THAP4Q8WY91 577 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 CCDC74BQ96LY2 380 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 ADAM30Q9UKF2 790 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 ZNF346Q9UL40 294 aaKnown RBP17.35■□□□□ 0.37
YBX3-201ENST00000228251 KLHDC2Q9Y2U9 406 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 NPFFR2Q9Y5X5 522 aa17.35■□□□□ 0.37
YBX3-201ENST00000228251 TMED7-TICAM2A0A0A6YYA0 188 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 TMEM72A0PK05 275 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 KHNYNO15037 678 aaKnown RBP17.34■□□□□ 0.37
YBX3-201ENST00000228251 SCO2O43819 266 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 GPRIN2O60269 458 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 ALOX12BO75342 701 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms