RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 GFYI3L273 518 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 KLK10O43240 276 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 POLR2IP36954 125 aaKnown RBP17.02■□□□□ 0.32
CLIP2-201ENST00000223398 RPL34P49207 117 aaKnown RBP17.02■□□□□ 0.32
CLIP2-201ENST00000223398 LCN10Q6JVE6 187 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 NPSR1Q6W5P4 371 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 DEFB124Q8NES8 71 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 TRGV8A0A0C4DH27 118 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 PRAMEF4O60810 478 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 ITGAMP11215 1152 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 CA5AP35218 305 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 MPLP40238 635 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 CYP4V2Q6ZWL3 525 aaPredicted RBP17.02■□□□□ 0.32
CLIP2-201ENST00000223398 S100PBPQ96BU1 408 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 TRAPPC2LQ9UL33 140 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 P2RY10O00398 339 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 BET1O15155 118 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 TMPRSS11DO60235 418 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 CDK2P24941 298 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 MAVSQ7Z434 540 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 BCDIN3DQ7Z5W3 292 aaKnown RBP17.02■□□□□ 0.31
CLIP2-201ENST00000223398 SPTY2D1-AS1A0A0U1RR47 76 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 SEMA4CQ9C0C4 833 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 CHST8Q9H2A9 424 aa17.02■□□□□ 0.31
CLIP2-201ENST00000223398 WSB2Q9NYS7 404 aaPredicted RBP17.02■□□□□ 0.31
CLIP2-201ENST00000223398 A0A087WUU8 490 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 SHOXO15266 292 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 NSA2O95478 260 aaKnown RBP17.01■□□□□ 0.31
CLIP2-201ENST00000223398 ITGB2P05107 769 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 CD40LGP29965 261 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 DAPP51397 102 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 CAV3P56539 151 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 SPARTQ8N0X7 666 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 OR2I1PQ8NGU4 316 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 NRG4Q8WWG1 115 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 PHB2Q99623 299 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 SERGEFQ9UGK8 458 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 ASB1Q9Y576 335 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 MAB21L2Q9Y586 359 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 HPGDSO60760 199 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 SEC14L2O76054 403 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 OR8U9P0C7N5 309 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 ATF4P18848 351 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF691Q5VV52 312 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 RBM45Q8IUH3 476 aaKnown RBP17.01■□□□□ 0.31
CLIP2-201ENST00000223398 SORCS2Q96PQ0 1159 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 PPT2Q9UMR5 302 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 A0A1W2PNR3 127 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 CD300LBA8K4G0 201 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 SOCS6O14544 535 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 PTAFRP25105 342 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 S100A2P29034 98 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 CLDN12P56749 244 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 FOXK2Q01167 660 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 TMEM71Q6P5X7 295 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 BATF2Q8N1L9 274 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 BCORP1Q8N888 145 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 TFAP2CQ92754 450 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 RAB39BQ96DA2 213 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 CMSS1Q9BQ75 279 aaKnown RBP17.01■□□□□ 0.31
CLIP2-201ENST00000223398 CORINQ9Y5Q5 1042 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 PCP4L1A6NKN8 68 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 OR2J2O76002 312 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 WNT11O96014 354 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 GABREP78334 506 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF281Q9Y2X9 895 aa17.01■□□□□ 0.31
CLIP2-201ENST00000223398 BCAS1O75363 584 aaPredicted RBP17■□□□□ 0.31
CLIP2-201ENST00000223398 GRPP07492 148 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 SLC2A1P11166 492 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 ELAVL4P26378 380 aaKnown RBP17■□□□□ 0.31
CLIP2-201ENST00000223398 P2RX1P51575 399 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 YOD1Q5VVQ6 348 aaPredicted RBP17■□□□□ 0.31
CLIP2-201ENST00000223398 CA13Q8N1Q1 262 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 SDSLQ96GA7 329 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 ZC3H10Q96K80 434 aaKnown RBP17■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF681Q96N22 645 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 ACKR4Q9NPB9 350 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 IGHV3-64DA0A0J9YX35 117 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 DSCR3O14972 297 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 DUSP2Q05923 314 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 FOXRED1Q96CU9 486 aaPredicted RBP17■□□□□ 0.31
CLIP2-201ENST00000223398 AMBRA1Q9C0C7 1298 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 MKRN2OSH3BPM6 223 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 CX3CR1P49238 355 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 GRINAQ7Z429 371 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 NT5DC2Q9H857 520 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 INPP5EQ9NRR6 644 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 TAS2R3Q9NYW6 316 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 WNT16Q9UBV4 365 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 LYRM1O43325 122 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 VEGFCP49767 419 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 EDDM3BP56851 147 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 EMX1Q04741 257 aaPredicted RBP17■□□□□ 0.31
CLIP2-201ENST00000223398 LTBQ06643 244 aa17■□□□□ 0.31
CLIP2-201ENST00000223398 RFPL3O75679 317 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 ZGLP1P0C6A0 271 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 APEHP13798 732 aaKnown RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SRSF5Q13243 272 aaKnown RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 FAM69AQ5T7M9 428 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms