RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TXNL4BQ9NX01 149 aaKnown RBP12.58□□□□□ -0.4
SF3A1-201ENST00000215793 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 HSBP1L1C9JCN9 74 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 ITGB2P05107 769 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 ZNF26P17031 533 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 GDNFP39905 211 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SSR4P51571 173 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 FOXK2Q01167 660 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 C18orf63Q68DL7 685 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 KLHDC8BQ8IXV7 354 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 RDH10Q8IZV5 341 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 ABHD4Q8TB40 342 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 TSSK2Q96PF2 358 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 MARCH5Q9NX47 278 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 MUTYHQ9UIF7 546 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 OSGIN1Q9UJX0 560 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 CD14P08571 375 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 ERVFC1P60507 584 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 MC2RQ01718 297 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SFXN4Q6P4A7 337 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 IDO2Q6ZQW0 420 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 BPHLQ86WA6 291 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 LMNTD1Q8N9Z9 388 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 BBS1Q8NFJ9 593 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 NXPE3Q969Y0 559 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SLC6A18Q96N87 628 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SLCO5A1Q9H2Y9 848 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 DYNLRB1Q9NP97 96 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 OBP2AQ9NY56 170 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SPHK1Q9NYA1 384 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 CAMK2AQ9UQM7 478 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 MAKP20794 623 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 CLDN17P56750 224 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 RPS25P62851 125 aaKnown RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 CHTF18Q8WVB6 975 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 MED20Q9H944 212 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 NUMBLQ9Y6R0 609 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 TMED7-TICAM2A0A0A6YYA0 188 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 H3BNC9 293 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 F2RL1P55085 397 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 CSNK1G2P78368 415 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SRPXP78539 464 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 POU4F3Q15319 338 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 PAPD4Q6PIY7 484 aaKnown RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 LYPD4Q6UWN0 246 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 EID2Q8N6I1 236 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 UTP23Q9BRU9 249 aaKnown RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 ZBP1Q9H171 429 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 METTL17Q9H7H0 456 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-201ENST00000215793 SIAEQ9HAT2 523 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 TMED7Q9Y3B3 224 aa12.57□□□□□ -0.4
SF3A1-201ENST00000215793 FAM155AB1AL88 458 aaPredicted RBP12.56□□□□□ -0.4
SF3A1-201ENST00000215793 K7EPK0 472 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 MSTNO14793 375 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 ABLIM3O94929 683 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 UTS2O95399 124 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 FCGR2AP12318 317 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 NPPBP16860 134 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 KITLGP21583 273 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 VEGFCP49767 419 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 SLX4IPQ5VYV7 408 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 MFSD12Q6NUT3 480 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 FBXW12Q6X9E4 464 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 MED25Q71SY5 747 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 PELI3Q8N2H9 469 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 FAM71E2Q8N5Q1 922 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 OR1J2Q8NGS2 313 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 OR52N1Q8NH53 320 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 NMNAT3Q96T66 252 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 CCL26Q9Y258 94 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 HEMK1Q9Y5R4 338 aaPredicted RBP12.56□□□□□ -0.4
SF3A1-201ENST00000215793 OR5K3A6NET4 321 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 S100A7P31151 101 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 SLC9A3R2Q15599 337 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 SLC36A2Q495M3 483 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 NHSL2Q5HYW2 709 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 FAM71E1Q6IPT2 247 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 NPSR1Q6W5P4 371 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 ENTHD1Q8IYW4 607 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 SLC38A1Q9H2H9 487 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 C1orf123Q9NWV4 160 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 ETV7Q9Y603 341 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
SF3A1-201ENST00000215793 A0A0U1RQK1 487 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 GPR171O14626 319 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 YKT6O15498 198 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 GMDSO60547 372 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 RPL35P42766 123 aaKnown RBP12.56□□□□□ -0.4
SF3A1-201ENST00000215793 CSNK1EP49674 416 aaKnown RBP12.56□□□□□ -0.4
SF3A1-201ENST00000215793 RRADP55042 308 aa12.56□□□□□ -0.4
SF3A1-201ENST00000215793 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms