RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SPOCK1Q08629 439 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 ATAD3CQ5T2N8 411 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 RAET1LQ5VY80 246 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 OR2T4Q8NH00 348 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 SLX1AQ9BQ83 275 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 BCL7BQ9BQE9 202 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DHDHQ9UQ10 334 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 SLC19A2O60779 497 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 AK1P00568 194 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 IL1AP01583 271 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 GLB1P16278 677 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 RPS18P62269 152 aaKnown RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 SRYQ05066 204 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 MAPK14Q16539 360 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 NDUFA5Q16718 116 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 EEF1A1P5Q5VTE0 462 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 METAP1DQ6UB28 335 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 LYPD4Q6UWN0 246 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 LRRN1Q6UXK5 716 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 LINC00346Q8IVM7 164 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 FAM71F1Q96KD3 344 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 SERINC1Q9NRX5 453 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 RDH8Q9NYR8 311 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 MGAT4AQ9UM21 535 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 SLC22A7Q9Y694 548 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PIEZO1Q92508 2521 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF878C9JN71 531 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 TECTAO75443 2155 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 TCN2P20062 427 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PGCP20142 388 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PCMT1P22061 227 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PRPH2P23942 346 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 HOXD12P35452 270 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 MPLP40238 635 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 CEBPGP53567 150 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 CCDC58Q4VC31 144 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 NKAPLQ5M9Q1 402 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 YOD1Q5VVQ6 348 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 RPL13AP3Q6NVV1 102 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PEG10Q86TG7 708 aaKnown RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 LRRC56Q8IYG6 542 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 C16orf52Q8NHV5 167 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 GRPEL2Q8TAA5 225 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 CCDC74BQ96LY2 380 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 DUSP23Q9BVJ7 150 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 CXorf51AA0A1B0GTR3 108 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PTHLHP12272 177 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 NID1P14543 1247 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 GABRA5P31644 462 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 DUSP3P51452 185 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PRAMEF8Q5VWM4 474 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PRAMEF7Q5VXH5 474 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 SLC6A19Q695T7 634 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 FAAP20Q6NZ36 180 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF620Q6ZNG0 422 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 MARCH3Q86UD3 253 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF321PQ8N8H1 164 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 AGBL5Q8NDL9 886 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 OR4M1Q8NGD0 313 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 LRRC20Q8TCA0 184 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 LGALS14Q8TCE9 139 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 DEDD2Q8WXF8 326 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 TEAD3Q99594 435 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 PITX2Q99697 317 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 MESP1Q9BRJ9 268 aa11.07□□□□□ -0.64
CHPF2-201ENST00000035307 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 CHMP1AQ9HD42 196 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 SIRT3Q9NTG7 399 aaPredicted RBP11.07□□□□□ -0.64
CHPF2-201ENST00000035307 TANC1Q9C0D5 1861 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 HIST1H1CP16403 213 aaKnown RBP11.06□□□□□ -0.64
CHPF2-201ENST00000035307 EMDP50402 254 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 TLE3Q04726 772 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 PRKCDQ05655 676 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF425Q6IV72 752 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 FTMTQ8N4E7 242 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ABHD4Q8TB40 342 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 VOPP1Q96AW1 172 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ALG12Q9BV10 488 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 NOX4Q9NPH5 578 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 AKIP1Q9NQ31 210 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ACOXLQ9NUZ1 547 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ASB6Q9NWX5 421 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ITGB1BP2Q9UKP3 347 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF346Q9UL40 294 aaKnown RBP11.06□□□□□ -0.64
CHPF2-201ENST00000035307 B3GNT3Q9Y2A9 372 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 DIDO1Q9BTC0 2240 aaKnown RBP11.06□□□□□ -0.64
CHPF2-201ENST00000035307 ZSCAN5BA6NJL1 495 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 CER1O95813 267 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 POU3F1Q03052 451 aaPredicted RBP11.06□□□□□ -0.64
CHPF2-201ENST00000035307 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 GALNT6Q8NCL4 622 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 OR4Q3Q8NH05 313 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 OR11A1Q9GZK7 315 aa11.06□□□□□ -0.64
CHPF2-201ENST00000035307 PRDM9Q9NQV7 894 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms