RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PRDM9Q9NQV7 894 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SLCO3A1Q9UIG8 710 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 EMC9Q9Y3B6 208 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CIDEAO60543 219 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FZD7O75084 574 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 DEDDO75618 318 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 HTR1FP30939 366 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TRHRP34981 398 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TSPAN31Q12999 210 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TRAT1Q6PIZ9 186 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 LRRN4CLQ8ND94 238 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 MAP6Q96JE9 813 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SYT17Q9BSW7 474 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 RBCK1Q9BYM8 510 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 METTL9Q9H1A3 318 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 IL20Q9NYY1 176 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 B4GALT6Q9UBX8 382 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FOXO6A8MYZ6 492 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 THBS1P07996 1170 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SFTPCP11686 197 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ELK4P28324 431 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 GABRA2P47869 451 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TCTAP57738 103 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 PPP1CAP62136 330 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 GPLD1P80108 840 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 UGCGQ16739 394 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ADAM5Q6NVV9 412 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 IL34Q6ZMJ4 242 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SCARB1Q8WTV0 552 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 RPUSD4Q96CM3 377 aaKnown RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SH3YL1Q96HL8 342 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 DPCDQ9BVM2 203 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 RIMS3Q9UJD0 308 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 HELZP42694 1942 aaKnown RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 KRBA1A5PL33 1030 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TOXO94900 526 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 HTR2CP28335 458 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 NAA10P41227 235 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SGSHP51688 502 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 PDE7AQ13946 482 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SHHQ15465 462 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 RGNQ15493 299 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SLC22A6Q4U2R8 563 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ACOT7LQ6ZUV0 252 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FAM124AQ86V42 546 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 MARC2Q969Z3 335 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 NUDT16L1Q9BRJ7 211 aaKnown RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 LHPPQ9H008 270 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 OR51B5Q9H339 312 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 C14orf119Q9NWQ9 140 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 NDUFB11Q9NX14 153 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 GPR55Q9Y2T6 319 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 IQCF5A8MTL0 148 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CSF2P04141 144 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 MAN2A2P49641 1150 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 WDR73Q6P4I2 378 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CPNE8Q86YQ8 564 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ARHGEF39Q8N4T4 335 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SIGLECL1Q8N7X8 197 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 BPIFA2Q96DR5 249 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 DDOQ99489 341 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 POT1Q9NUX5 634 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 PADI1Q9ULC6 663 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TRAV18A0A075B6X5 111 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ADRB1P08588 477 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 MAGEB1P43366 347 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 GPR85P60893 370 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SUMO1P63165 101 aaKnown RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 PIWIL3Q7Z3Z3 882 aaKnown RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 PIM3Q86V86 326 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CDC20BQ86Y33 519 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ANKRD53Q8N9V6 530 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 OR10J5Q8NHC4 309 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CLMPQ9H6B4 373 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ZBTB20Q9HC78 741 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 ACAD8Q9UKU7 415 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FASLGP48023 281 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 C2orf76Q3KRA6 126 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TANGO2Q6ICL3 276 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FBXW12Q6X9E4 464 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 DGAT2L6Q6ZPD8 337 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 C1orf174Q8IYL3 243 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CCDC116Q8IYX3 515 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 IL22RA1Q8N6P7 574 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SLC39A7Q92504 469 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 NEURL3Q96EH8 262 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SLC29A1Q99808 456 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SSUH2Q9Y2M2 353 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 H7BYZ3 331 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 CH25HO95992 272 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 APOA2P02652 100 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 OR5H8P0DN80 308 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 LTBQ06643 244 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FCRL6Q6DN72 434 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 FAM58AQ8N1B3 248 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 TRIM77I1YAP6 450 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 I6L893 689 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-201ENST00000011700 DHRS4L1P0CG22 281 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 SRMP19623 302 aa5.67□□□□□ -1.5
VPS13D-201ENST00000011700 NTSR1P30989 418 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms