RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Mmp1bQ9EPL6 463 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Igkv10-95A0A0G2JFY3 115 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm7697A0A0J9YUH2 350 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm9495A0A0J9YUZ3 350 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 4930402F06RikA2AUQ8 332 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Chrna10B2RX82 447 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr152G3X9L8 316 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 OpcmlG5E8G3 345 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 P01851 173 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 P01852 173 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 LhcgrP30730 700 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc11a1P41251 548 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ucp3P56501 308 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rps15P62843 145 aaKnown RBP12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tmprss11bQ14C59 416 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pdp1Q3UV70 538 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Foxd3Q61060 465 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fbxo42Q6PDJ6 717 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gpr75Q6X632 540 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Scml4Q80VG1 408 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gstm7Q80W21 218 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mettl27Q8BGM4 238 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Muc20Q8BUE7 656 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rnf208Q8K0W3 265 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mboat2Q8R3I2 519 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ndc1Q8VCB1 673 aaKnown RBP12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Duoxa1Q8VE49 341 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ccdc115Q8VE99 180 aaKnown RBP12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pcdhb16Q91Y03 802 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc46a3Q9DC26 460 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Keg1Q9DCY0 295 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tmem176bQ9R1Q6 263 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 RlimQ9WTV7 600 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Asah1Q9WV54 394 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ilf3Q9Z1X4 898 aaKnown RBP12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 9930021J03RikH3BKP8 2027 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Il17dA0A0B4J1G4 205 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Klhl15A2AAX3 604 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hacd4A2AKM2 232 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr110A2RT31 317 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Acyp2P56375 106 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gnb5P62881 395 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Wbp1P97764 304 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 XkrxQ5GH68 449 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ttf1Q62187 859 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 SpicQ6P3D7 242 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 RgmaQ6PCX7 454 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr111Q7TRK1 317 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mgat4aQ812G0 535 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mettl6Q8BVH9 282 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ankmy1Q8C0W1 906 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lyrm4Q8K215 91 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr868Q8VFI8 309 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr120Q8VFQ2 330 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 BambiQ9D0L6 260 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fam122cQ9D5J5 180 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Izumo1rQ9EQF4 244 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Popdc3Q9ES81 291 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 AireQ9Z0E3 552 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Padi1Q9Z185 662 aa12.39□□□□□ -0.43
Nup88-201ENSMUST00000035283 Prr23a2D3YWX5 253 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Prdm13E9PZZ1 754 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm5799E9Q2M1 201 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fbxw28E9Q8A4 466 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm21812J3QN84 227 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fpr-s1O08790 351 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Bhlhe40O35185 411 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cd1d1P11609 336 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cd1d2P11610 336 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rplp0P14869 317 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 AhrP30561 848 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zdhhc2P59267 366 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fbxw16Q497Z0 464 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dyrk1aQ61214 763 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Traf4Q61382 470 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tdpoz5Q6YCH1 340 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Scgb1c1Q7M742 95 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Q8BHG2 160 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm10283Q8C3L5 117 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fam199xQ8K2D0 388 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr569Q8VGZ2 314 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r85Q8VIB8 308 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 NmbQ9CR53 121 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r56Q9EPS9 310 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cdh20Q9Z0M3 801 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zfp352A2AML7 551 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1234A2AVK5 314 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Smpd5D6MZJ6 483 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zfp707F6QUN2 391 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Nipsnap2O55126 281 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hsd17b12O70503 312 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zfp1P08042 402 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ifi204P0DOV2 619 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fcer1aP20489 250 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hoxd12P23812 268 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mapk14P47811 360 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Aqp2P56402 271 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 CtnsP57757 367 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cdk5r1P61809 307 aa12.38□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tfb2mQ3TL26 396 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms