RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 AGTR1P30556 359 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 PPP1R8Q12972 351 aaKnown RBP11.75□□□□□ -0.53
GTF3A-209ENST00000640289 DGCR6Q14129 220 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 SEC23BQ15437 767 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ZSCAN26Q16670 478 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 XKRXQ6PP77 449 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF730Q6ZMV8 503 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 FAM214BQ7L5A3 538 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 NUFIP2Q7Z417 695 aaKnown RBP11.75□□□□□ -0.53
GTF3A-209ENST00000640289 BTLAQ7Z6A9 289 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 GPAT4Q86UL3 456 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 NRMQ8IXM6 262 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 CA5BP1Q8WTZ4 195 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ACOT11Q8WXI4 607 aaPredicted RBP11.75□□□□□ -0.53
GTF3A-209ENST00000640289 POP5Q969H6 163 aaKnown RBP11.75□□□□□ -0.53
GTF3A-209ENST00000640289 SLCO4A1Q96BD0 722 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 STARD4Q96DR4 205 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 SGTBQ96EQ0 304 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 RSRC1Q96IZ7 334 aaKnown RBP11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF347Q96SE7 839 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 FUZQ9BT04 418 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 SFXN3Q9BWM7 321 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ASPNQ9BXN1 380 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 KLHL4Q9C0H6 718 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 BCO1Q9HAY6 547 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 CHST11Q9NPF2 352 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 GLRX2Q9NS18 164 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 VNN3Q9NY84 501 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF629Q9UEG4 869 aaPredicted RBP11.75□□□□□ -0.53
GTF3A-209ENST00000640289 DVL2O14641 736 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 FKBP6O75344 327 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 OR7A10O76100 309 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 CLDN14O95500 239 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 IL18BPO95998 194 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 MT-ATP6P00846 226 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 CGAP01215 116 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 YES1P07947 543 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 FUT1P19526 365 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 MAKP20794 623 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 AGAP20933 346 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 EDNRAP25101 427 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 OPRM1P35372 400 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 CTBP2P56545 445 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 PMS2P3Q13401 168 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 SLC17A1Q14916 467 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 MFSD13AQ14CX5 517 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 PDK3Q15120 406 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 EXOC3L2Q2M3D2 409 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 TMEM201Q5SNT2 666 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 TMEM225Q6GV28 225 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 MBOAT2Q6ZWT7 520 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 H1FNTQ75WM6 255 aaPredicted RBP11.74□□□□□ -0.53
GTF3A-209ENST00000640289 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.74□□□□□ -0.53
GTF3A-209ENST00000640289 MAMDC2Q7Z304 686 aaPredicted RBP11.74□□□□□ -0.53
GTF3A-209ENST00000640289 OR5J2Q8NH18 312 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 LILRB4Q8NHJ6 448 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
GTF3A-209ENST00000640289 C12orf49Q9H741 205 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 FKRPQ9H9S5 495 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 NANSQ9NR45 359 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 CCM2LQ9NUG4 571 aaPredicted RBP11.74□□□□□ -0.53
GTF3A-209ENST00000640289 EMC9Q9Y3B6 208 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 CORINQ9Y5Q5 1042 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 LYVE1Q9Y5Y7 322 aa11.74□□□□□ -0.53
GTF3A-209ENST00000640289 IGKV3D-15A0A087WSY6 115 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 A1L4Q6 167 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF724A8MTY0 619 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 EEF1E1-BLOC1S5C9J1V9 151 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 MS4A18H0YCH9 400 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 TNFRSF11BO00300 401 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 EEF1E1O43324 174 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 SMNDC1O75940 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 HPRP00739 348 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 CST1P01037 141 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 IGF2P01344 180 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 ASAH2BP0C7U1 165 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 NQO1P15559 274 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 NTF4P34130 210 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 LIMS1P48059 325 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 SLC16A1P53985 500 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 SMIM11AP58511 58 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 IL1RL1Q01638 556 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 PRKCDQ05655 676 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 KPNB1Q14974 876 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 MS4A18Q3C1V0 323 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 OR2T5Q6IEZ7 315 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 RRM2BQ7LG56 351 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 LUZP2Q86TE4 346 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 RNF113BQ8IZP6 322 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 PAPD5Q8NDF8 572 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 OR9K2Q8NGE7 335 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 OR6K3Q8NGY3 331 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 OR2T29Q8NH02 315 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 BPIFA2Q96DR5 249 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF385AQ96PM9 386 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 GP6Q9HCN6 339 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms