RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 C7orf34Q96L11 122 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 RASL10BQ96S79 203 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 CHID1Q9BWS9 393 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 PINK1Q9BXM7 581 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 TRIM2Q9C040 744 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 TINAGL1Q9GZM7 467 aaPredicted RBP7.26□□□□□ -1.25
SCARB2-220ENST00000640076 TRIM45Q9H8W5 580 aaPredicted RBP7.26□□□□□ -1.25
SCARB2-220ENST00000640076 RNPEPL1Q9HAU8 725 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 CACYBPQ9HB71 228 aaKnown RBP7.26□□□□□ -1.25
SCARB2-220ENST00000640076 IL1RAPQ9NPH3 570 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 FLRT3Q9NZU0 649 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 STX18Q9P2W9 335 aaKnown RBP7.26□□□□□ -1.25
SCARB2-220ENST00000640076 IFT52Q9Y366 437 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 SH3GLB1Q9Y371 365 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 ADAM18Q9Y3Q7 739 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 CHST2Q9Y4C5 530 aa7.26□□□□□ -1.25
SCARB2-220ENST00000640076 LGI1O95970 557 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 ADRB1P08588 477 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 PRKAR1AP10644 381 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 CYP4B1P13584 511 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 MAGEA2P43356 314 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 SLC15A1P46059 708 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 OR1E2P47887 323 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 NPY4RP50391 375 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF81P51508 661 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 MLF1P58340 268 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 VLDLRP98155 873 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 COTL1Q14019 142 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 IQCCQ4KMZ1 466 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 LIN52Q52LA3 116 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 KLHL26Q53HC5 615 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 MRPL2Q5T653 305 aaKnown RBP7.25□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF836Q6ZNA1 936 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 CLIP4Q8N3C7 705 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 TMEM116Q8NCL8 245 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 OIT3Q8WWZ8 545 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 PSMF1Q92530 271 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF354BQ96LW1 612 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 HOXD1Q9GZZ0 328 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 CDCP1Q9H5V8 836 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF552Q9H707 407 aaPredicted RBP7.25□□□□□ -1.25
SCARB2-220ENST00000640076 ZBTB20Q9HC78 741 aaPredicted RBP7.25□□□□□ -1.25
SCARB2-220ENST00000640076 UBQLN4Q9NRR5 601 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 NKX1-2Q9UD57 310 aaPredicted RBP7.25□□□□□ -1.25
SCARB2-220ENST00000640076 RCE1Q9Y256 329 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 YARS2Q9Y2Z4 477 aaKnown RBP7.25□□□□□ -1.25
SCARB2-220ENST00000640076 HEATR5AQ86XA9 2040 aa7.25□□□□□ -1.25
SCARB2-220ENST00000640076 XKRY2A2RUG3 117 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CDHR4A6H8M9 788 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF785A8K8V0 405 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 A8MZ25 164 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 M0QYG6 137 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 LAMA5O15230 3695 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 HS6ST1O60243 411 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ICOSLGO75144 302 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 OXSR1O95747 527 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 NGFRP08138 427 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ANPEPP15144 967 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 TBXA2RP21731 343 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 PRKACBP22694 351 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 TTKP33981 857 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 WNT5AP41221 380 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 TMED10P49755 219 aaKnown RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 FBXW4P57775 412 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 HFEQ30201 348 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 EIPR1Q53HC9 387 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 COLEC12Q5KU26 742 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 APOOLQ6UXV4 268 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 TSEN54Q7Z6J9 526 aaKnown RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ZDHHC21Q8IVQ6 265 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 LILRA2Q8N149 483 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SIRT6Q8N6T7 355 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF614Q8N883 585 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CLEC1AQ8NC01 280 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 OR4D11Q8NGI4 311 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ABHD5Q8WTS1 349 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 DTNBP1Q96EV8 351 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 THOC3Q96J01 351 aaKnown RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CCNL2Q96S94 520 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 PKP2Q99959 881 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 WFDC6Q9BQY6 131 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 MGAQ8IWI9 3026 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CACNA1GO43497 2377 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 PTPRQQ9UMZ3 2332 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SERINC4A6NH21 518 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ARGFXA6NJG6 315 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 TEX22C9J3V5 150 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 hCG_2039718K7EN88 272 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SULT1B1O43704 296 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 BCAS1O75363 584 aaPredicted RBP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 OR6B1O95007 311 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ALX3O95076 343 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 IFNW1P05000 195 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 FABP3P05413 133 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 FCGR1AP12314 374 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 ITGA3P26006 1051 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 PTBP1P26599 531 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SOX3P41225 446 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 CASP3P42574 277 aa7.24□□□□□ -1.25
SCARB2-220ENST00000640076 SSR4P51571 173 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms