RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SLC25A52Q3SY17 297 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 PIGGQ5H8A4 983 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 C10orf120Q5SQS8 335 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 BEND3Q5T5X7 828 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 TMEM225Q6GV28 225 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 FAM43BQ6ZT52 329 aaPredicted RBP2.5□□□□□ -2.01
CCDC7-216ENST00000640058 ACOT7LQ6ZUV0 252 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 NLRP9Q7RTR0 991 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 TBC1D21Q8IYX1 336 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 SLC38A6Q8IZM9 456 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 CLEC4FQ8N1N0 589 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 CYB561D1Q8N8Q1 229 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 FANK1Q8TC84 345 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 CCNL2Q96S94 520 aaPredicted RBP2.5□□□□□ -2.01
CCDC7-216ENST00000640058 ING2Q9H160 280 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 NXF5Q9H1B4 397 aaKnown RBP2.5□□□□□ -2.01
CCDC7-216ENST00000640058 SMYD3Q9H7B4 428 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 IL36GQ9NZH8 169 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 KIF25Q9UIL4 384 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 POLDIP2Q9Y2S7 368 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 SCN2AQ99250 2005 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 IGHV3OR16-13A0A075B7E8 117 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 LRP5LA4QPB2 252 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 GPR89AB7ZAQ6 455 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 F5H6K3 240 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 CXCL11O14625 94 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 CXCL13O43927 109 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 SNNO75324 88 aaPredicted RBP2.49□□□□□ -2.01
CCDC7-216ENST00000640058 LRATO95237 230 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 IGLV3-19P01714 112 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 RETP07949 1114 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 GPR89BP0CG08 455 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 CHTF8P0CG12 524 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 PNMTP11086 282 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 CALRP27797 417 aaKnown RBP2.49□□□□□ -2.01
CCDC7-216ENST00000640058 LEPP41159 167 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 MAP3K8P41279 467 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 TFPI2P48307 235 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 EFNB2P52799 333 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 CRISP3P54108 245 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 HSPA2P54652 639 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 KLRC3Q07444 240 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 PDK3Q15120 406 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 SLC15A2Q16348 729 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 TP53I3Q53FA7 332 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 OR2L13Q8N349 312 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 ZNF615Q8N8J6 731 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 MRPS31Q92665 395 aaKnown RBP2.49□□□□□ -2.01
CCDC7-216ENST00000640058 SLC41A3Q96GZ6 507 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 TTC25Q96NG3 672 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 LRRN3Q9H3W5 708 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 GORASP2Q9H8Y8 452 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 SLC17A5Q9NRA2 495 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 DEC1Q9P2X7 70 aa2.49□□□□□ -2.01
CCDC7-216ENST00000640058 KIF26AQ9ULI4 1882 aaPredicted RBP2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ATAD2BQ9ULI0 1458 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 C15orf38-AP3S2A0A0A6YYH1 394 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 METTL21EPA6NDL7 271 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 VSTM2BA6NLU5 285 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 PRKAB2O43741 272 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 MRPL3P09001 348 aaKnown RBP2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ICAM2P13598 275 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 IMPDH1P20839 514 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 GRIA1P42261 906 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 TDO2P48775 406 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 KLK7P49862 253 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ACTR1AP61163 376 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ACTA2P62736 377 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ACTC1P68032 377 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 FAM83EQ2M2I3 478 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 KLF17Q5JT82 389 aaPredicted RBP2.48□□□□□ -2.01
CCDC7-216ENST00000640058 C1orf220Q5T0J3 134 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 TMEM123Q8N131 208 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ZNF709Q8N972 641 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 OR56B4Q8NH76 319 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 ACER1Q8TDN7 264 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 NDRG1Q92597 394 aaKnown RBP2.48□□□□□ -2.01
CCDC7-216ENST00000640058 TSNARE1Q96NA8 513 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 EDEM2Q9BV94 578 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 VCPKMTQ9H867 229 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 GNPTGQ9UJJ9 305 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 TIMM10BQ9Y5J6 103 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 PNPLA6Q8IY17 1366 aa2.48□□□□□ -2.01
CCDC7-216ENST00000640058 TRDCB7Z8K6 153 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 E7ESA3 106 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 N4BP1O75113 896 aaKnown RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 LGALS2P05162 132 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 PNMA6AP0CW24 399 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 YWHABP31946 246 aaKnown RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 PRPHP41219 470 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 DAP3P51398 398 aaKnown RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 CRYBB1P53674 252 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 GRB7Q14451 532 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 EXOC3L2Q2M3D2 409 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 LRRC23Q53EV4 343 aaPredicted RBP2.47□□□□□ -2.01
CCDC7-216ENST00000640058 SFT2D3Q587I9 215 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 C1orf100Q5SVJ3 147 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 GPRC6AQ5T6X5 926 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 GPR157Q5UAW9 335 aa2.47□□□□□ -2.01
CCDC7-216ENST00000640058 ATL3Q6DD88 541 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms