RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 RUNX3Q13761 415 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 PARP15Q460N3 678 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 C9orf135Q5VTT2 229 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 TWF2Q6IBS0 349 aaKnown RBP4.96□□□□□ -1.62
RFC1-217ENST00000639695 FNDC5Q8NAU1 212 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 PLPPR1Q8TBJ4 325 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 TRIM15Q9C019 465 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 HOXC10Q9NYD6 342 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 TBC1D24Q9ULP9 559 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 STAP1Q9ULZ2 295 aa4.96□□□□□ -1.62
RFC1-217ENST00000639695 TRAV25A0A0B4J276 109 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 SMCO2A6NFE2 343 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 LRRIQ3A6PVS8 624 aaPredicted RBP4.95□□□□□ -1.62
RFC1-217ENST00000639695 GFYI3L273 518 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 AKR7A2O43488 359 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 ZNF253O75346 499 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 ZNF254O75437 659 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 STAMBPO95630 424 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 GSTM3P21266 225 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 SLC2A5P22732 501 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 UQCRFS1P47985 274 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 EIF3EP60228 445 aaKnown RBP4.95□□□□□ -1.62
RFC1-217ENST00000639695 RAB10P61026 200 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 MRPL23Q16540 153 aaKnown RBP4.95□□□□□ -1.62
RFC1-217ENST00000639695 PLCXD3Q63HM9 321 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 FBXL22Q6P050 247 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 ZNF343Q6P1L6 599 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 TMEM220Q6QAJ8 160 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 WDR74Q6RFH5 385 aaPredicted RBP4.95□□□□□ -1.62
RFC1-217ENST00000639695 SASS6Q6UVJ0 657 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 GPRIN3Q6ZVF9 776 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 OR4A4PQ8NGN8 299 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 FGF11Q92914 225 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 FGGYQ96C11 551 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 CCDC126Q96EE4 140 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 P2RY13Q9BPV8 354 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 MRPL45Q9BRJ2 306 aaKnown RBP4.95□□□□□ -1.62
RFC1-217ENST00000639695 BLZF1Q9H2G9 400 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 GNB4Q9HAV0 340 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 ZNF581Q9P0T4 197 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 PEF1Q9UBV8 284 aaKnown RBP4.95□□□□□ -1.62
RFC1-217ENST00000639695 NOTCH3Q9UM47 2321 aa4.95□□□□□ -1.62
RFC1-217ENST00000639695 INSRP06213 1382 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 TNIKQ9UKE5 1360 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 C2P06681 752 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 CT62P0C5K7 136 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 MYL2P10916 166 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 ZNF43P17038 809 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 CD1BP29016 333 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 IL2RGP31785 369 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 SHMT2P34897 504 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 UGT1A3P35503 534 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 CDKN1BP46527 198 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 CSNK1EP49674 416 aaKnown RBP4.94□□□□□ -1.62
RFC1-217ENST00000639695 SLC25A1P53007 311 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 CLDN8P56748 225 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 LMO4P61968 165 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 LRRC36Q1X8D7 754 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 NSUN5P1Q3KNT7 163 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 MARCH8Q5T0T0 291 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 SLC25A48Q6ZT89 311 aaKnown RBP4.94□□□□□ -1.62
RFC1-217ENST00000639695 NIPA1Q7RTP0 329 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 ACOT4Q8N9L9 421 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 OR52I1Q8NGK6 324 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 GLYATL2Q8WU03 294 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 PIBF1Q8WXW3 757 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 KIFAP3Q92845 792 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 PKNOX2Q96KN3 472 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 PGLYRP4Q96LB8 373 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 HSFY1Q96LI6 401 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 PRRC1Q96M27 445 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 ATP5SQ99766 215 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 APOL2Q9BQE5 337 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 CLEC5AQ9NY25 188 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 PTTG3PQ9NZH4 202 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 DCDC2Q9UHG0 476 aa4.94□□□□□ -1.62
RFC1-217ENST00000639695 RAB29O14966 203 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 MBTPS2O43462 519 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 TBL1XO60907 577 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 C1orf105O95561 183 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 OTCP00480 354 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 FGF1P05230 155 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 ANXA5P08758 320 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 RBMY1CP0DJD4 496 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 ATP5C1P36542 298 aaKnown RBP4.93□□□□□ -1.62
RFC1-217ENST00000639695 NAA10P41227 235 aaPredicted RBP4.93□□□□□ -1.62
RFC1-217ENST00000639695 GSSP48637 474 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 FBXW4P57775 412 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 AANATQ16613 207 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 PAGE2BQ5JRK9 111 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 OR2G6Q5TZ20 316 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 C22orf42Q6IC83 251 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 FRA10AC1Q70Z53 315 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 SLC16A14Q7RTX9 510 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 ZNF440Q8IYI8 595 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 FBXL16Q8N461 479 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 NOL4LQ96MY1 436 aaPredicted RBP4.93□□□□□ -1.62
RFC1-217ENST00000639695 VGLL1Q99990 258 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 SELENOIQ9C0D9 397 aa4.93□□□□□ -1.62
RFC1-217ENST00000639695 ACTR6Q9GZN1 396 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms