RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ITPKBP27987 946 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 LCN1P31025 176 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 SLC6A8P48029 635 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 GBX2P52951 348 aaPredicted RBP19.59■□□□□ 0.73
CLN6-224ENST00000638076 OR10A3P58181 314 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 TMPRSS9Q7Z410 1059 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 JAZF1Q86VZ6 243 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 OMA1Q96E52 524 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 LPAR4Q99677 370 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 SLC22A4Q9H015 551 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 RPRD1BQ9NQG5 326 aaKnown RBP19.59■□□□□ 0.73
CLN6-224ENST00000638076 GNG8Q9UK08 70 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 ATXN7L1Q9ULK2 861 aaPredicted RBP19.59■□□□□ 0.73
CLN6-224ENST00000638076 MPDZO75970 2070 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 FAM171A2A8MVW0 826 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 FAM25AB3EWG3 89 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 FAM25CB3EWG5 89 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 FAM25GB3EWG6 89 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 TO15178 435 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 OGG1O15527 345 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 SLC19A2O60779 497 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 F13BP05160 661 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 TOMM34Q15785 309 aaPredicted RBP19.58■□□□□ 0.73
CLN6-224ENST00000638076 TSSK4Q6SA08 328 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 NCDNQ9UBB6 729 aa19.58■□□□□ 0.73
CLN6-224ENST00000638076 A0A0C4DFX4 3053 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 GLCEO94923 617 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 ABCD3P28288 659 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 UQCRC1P31930 480 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 SIRPAP78324 504 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 CDK5R1Q15078 307 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 AGAP6Q5VW22 663 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 POMZP3Q6PJE2 187 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 ZNF517Q6ZMY9 492 aaPredicted RBP19.58■□□□□ 0.72
CLN6-224ENST00000638076 TPRA1Q86W33 373 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 LSM14AQ8ND56 463 aaKnown RBP19.58■□□□□ 0.72
CLN6-224ENST00000638076 SMIM19Q96E16 107 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 AGAP4Q96P64 663 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 TBL1XR1Q9BZK7 514 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 SLC7A5P2Q9GIP4 190 aa19.58■□□□□ 0.72
CLN6-224ENST00000638076 ARID1BQ8NFD5 2236 aaPredicted RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 ALG1L2C9J202 215 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 KHNYNO15037 678 aaKnown RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 NUDT14O95848 222 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 IMPDH2P12268 514 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 ELK1P19419 428 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 SDHAP31040 664 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 RPS5P46782 204 aaKnown RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 GDI2P50395 445 aaKnown RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 RPL18Q07020 188 aaKnown RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 IL10RAQ13651 578 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 LINC01590Q5TEZ4 76 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 SFXN4Q6P4A7 337 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 CHAC2Q8WUX2 184 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 THAP4Q8WY91 577 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 TAAR8Q969N4 342 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 TSSK2Q96PF2 358 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 ALG12Q9BV10 488 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 C12orf10Q9HB07 376 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 ACOXLQ9NUZ1 547 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 SLC6A5Q9Y345 797 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 COL5A1P20908 1838 aaPredicted RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 FER1L5A0AVI2 2057 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 A0A1W2PQD3 144 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 APEHP13798 732 aaKnown RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 PTBP1P26599 531 aaKnown RBP eCLIP19.57■□□□□ 0.72
CLN6-224ENST00000638076 TRIQKQ629K1 86 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 IL20RBQ6UXL0 311 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 ZNF574Q6ZN55 896 aaPredicted RBP19.57■□□□□ 0.72
CLN6-224ENST00000638076 COX15Q7KZN9 410 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 NANOGNBQ7Z5D8 188 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 RAB43Q86YS6 212 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 UBE2J2Q8N2K1 259 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 MMP28Q9H239 520 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 B3GAT2Q9NPZ5 323 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 SLC22A11Q9NSA0 550 aa19.57■□□□□ 0.72
CLN6-224ENST00000638076 PLA2G10O15496 165 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 CXCR1P25024 350 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 GRPRP30550 384 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 THBS2P35442 1172 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 DHPSP49366 369 aaPredicted RBP19.56■□□□□ 0.72
CLN6-224ENST00000638076 TMEM71Q6P5X7 295 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 UBQLNLQ8IYU4 475 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 PLPP5Q8NEB5 264 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 RASD1Q9Y272 281 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 IGHV3-20A0A0C4DH32 117 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 TRBV2A0A0J9YWF9 115 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 A0A1W2PPK0 400 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 CPNE3O75131 537 aaKnown RBP19.56■□□□□ 0.72
CLN6-224ENST00000638076 SERPINA3P01011 423 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 PNLIPRP2P54317 469 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 RHBDD2Q6NTF9 364 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 RPL22L1Q6P5R6 122 aaKnown RBP19.56■□□□□ 0.72
CLN6-224ENST00000638076 ZNF441Q8N8Z8 693 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 C19orf18Q8NEA5 215 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 KCTD12Q96CX2 325 aaKnown RBP19.56■□□□□ 0.72
CLN6-224ENST00000638076 DNAJA3Q96EY1 480 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 CDX2Q99626 313 aaPredicted RBP19.56■□□□□ 0.72
CLN6-224ENST00000638076 GRHPRQ9UBQ7 328 aa19.56■□□□□ 0.72
CLN6-224ENST00000638076 ZNF346Q9UL40 294 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms