RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF264O43296 627 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 HLA-AP01891 365 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 DRD5P21918 477 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FKBP2P26885 142 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CXADRP78310 365 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF91Q05481 1191 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IRF4Q15306 451 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF628Q5EBL2 1059 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RPS26P11Q5JNZ5 115 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 C6orf15Q6UXA7 325 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TSPYL5Q86VY4 417 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IRF2BP1Q8IU81 584 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IQCKQ8N0W5 287 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TECTBQ96PL2 329 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SOX7Q9BT81 388 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 WWTR1Q9GZV5 400 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RDH14Q9HBH5 336 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 HES4Q9HCC6 221 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TAS2R16Q9NYV7 291 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CACNG2Q9Y698 323 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 COL1A1P02452 1464 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MED1Q15648 1581 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ARPC4-TTLL3A0A0A6YYG9 625 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MEIS3P1A6NDR6 274 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM212A6NML5 194 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 BHLHE40O14503 412 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OR7A17O14581 309 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 UBBP0CG47 229 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RPS27AP62979 156 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 UBA52P62987 128 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FUT2Q10981 343 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 P2RY14Q15391 338 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TRIM61Q5EBN2 209 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PAPD4Q6PIY7 484 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MOB1BQ7L9L4 216 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TSEN54Q7Z6J9 526 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TUSC5Q8IXB3 177 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TMEFF1Q8IYR6 380 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FAM185AQ8N0U4 392 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ACOT4Q8N9L9 421 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ISOC1Q96CN7 298 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF582Q96NG8 517 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PEAK1Q9H792 1746 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IGLV3-22A0A075B6J6 115 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TRGV8A0A0C4DH27 118 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 NUDT19A8MXV4 375 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PIRO00625 290 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 HSD17B6O14756 317 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 GLAP06280 429 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ARSAP15289 507 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CEBPBP17676 345 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PCGF2P35227 344 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 AHRP35869 848 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 AMTP48728 403 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CXCR4P61073 352 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 KCNAB2Q13303 367 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FAM26DQ5JW98 314 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RPL7L1Q6DKI1 246 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 COX15Q7KZN9 410 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 C19orf47Q8N9M1 422 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OR52E1Q8NGJ3 308 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OR5AR1Q8NGP9 310 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF516Q92618 1163 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CDS1Q92903 461 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 LGALS12Q96DT0 336 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ARSGQ96EG1 525 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IKZF5Q9H5V7 419 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CICQ96RK0 1608 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 H7BYZ3 331 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 J3QR89 54 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FAM189A1O60320 539 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FOLR1P15328 257 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 BLVRBP30043 206 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MEOX1P50221 254 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 WNT7BP56706 349 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ARHGAP11BQ3KRB8 267 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM65Q6PI78 240 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 METAP1DQ6UB28 335 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 THNSL2Q86YJ6 484 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ADGRG5Q8IZF4 528 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FBXL14Q8N1E6 418 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TFAP2CQ92754 450 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RAB3CQ96E17 227 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 C4orf36Q96KX1 117 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RTL8AQ9BWD3 113 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PLEKHF2Q9H8W4 249 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 DMRT3Q9NQL9 472 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 DLG5Q8TDM6 1919 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 RAB40ALP0C0E4 278 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 HNF1AP20823 631 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 IMPA1P29218 277 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM31Q5JXX7 168 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 PRAMEF20Q5VT98 475 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 OR10G3Q8NGC4 313 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 RAB40AQ8WXH6 277 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 KIRREL1Q96J84 757 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 MRGPRX2Q96LB1 330 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 C1QTNF2Q9BXJ5 285 aa5.17□□□□□ -1.58
SCN1A-209ENST00000635750 GSTO2Q9H4Y5 243 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms