RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MCOLN2Q8IZK6 566 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 LRRC17Q8N6Y2 441 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 Q8N9G6 341 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MLKLQ8NB16 471 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CCDC197Q8NCU1 140 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF540Q8NDQ6 660 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 OR52B4Q8NGK2 314 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SMAP2Q8WU79 429 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM190Q8WZ59 177 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 P3H4Q92791 437 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 NCLNQ969V3 563 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 FAF2Q96CS3 445 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 NUS1Q96E22 293 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CELF6Q96J87 481 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CXorf58Q96LI9 332 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 C9orf72Q96LT7 481 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM218AQ96MZ4 157 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MCEEQ96PE7 176 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 UHRF2Q96PU4 802 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CSPG4P5Q96PW8 444 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SMIM14Q96QK8 99 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 OR2M4Q96R27 311 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TRIB3Q96RU7 358 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TUBGCP2Q9BSJ2 902 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 GSDMCQ9BYG8 508 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 RAB33BQ9H082 229 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 WWP1Q9H0M0 922 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CLSTN2Q9H4D0 955 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM231Q9H6L2 316 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 COQ10BQ9H8M1 238 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MTHFD2LQ9H903 347 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC52A3Q9NQ40 469 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SAMSN1Q9NSI8 373 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 GPATCH2LQ9NWQ4 482 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TECRQ9NZ01 308 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ERVK-18Q9QC07 812 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 IL20RAQ9UHF4 553 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MRTO4Q9UKD2 239 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 HPCAL4Q9UM19 191 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 DIMT1Q9UNQ2 313 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 WDR37Q9Y2I8 494 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MRPS18BQ9Y676 258 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MEGF8Q7Z7M0 2845 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ANKRD12Q6UB98 2062 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ABCA2Q9BZC7 2435 aa2.09□□□□□ -2.08
SMARCB1-208ENST00000634926 DIDO1Q9BTC0 2240 aaKnown RBP2.09□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A087WZY1 265 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A0U1RQS6 177 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A1B0GWJ7 208 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A1W2PR80 420 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 C15orf61A6NNL5 157 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 EFCAB7A8K855 629 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF487B1APH4 448 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR89AB7ZAQ6 455 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 C21orf140B9A014 251 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MFSD11O43934 449 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SCGB2A1O75556 95 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PALMO75781 387 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 FGFR1OPO95684 399 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ANGPTL1O95841 491 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 AK1P00568 194 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 HLA-DQB2P05538 268 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CALB1P05937 261 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 KRT7P08729 469 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR89BP0CG08 455 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 NCF1P14598 390 aaPredicted RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GP9P14770 177 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 EZRP15311 586 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GNB3P16520 340 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 NELFEP18615 380 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 XRCC1P18887 633 aaPredicted RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MIPP30301 263 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CA5AP35218 305 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PCK1P35558 622 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 HSPA9P38646 679 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ACTR1BP42025 376 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 GNPDA1P46926 289 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 SPINT3P49223 89 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 FHITP49789 147 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MTTPP55157 894 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CDH6P55285 790 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 TPI1P60174 286 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ACTR1AP61163 376 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RPL26P61254 145 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PPP1CAP62136 330 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 UBE2HP62256 183 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 BTG1P62324 171 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CDKL1Q00532 357 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 MYBPC1Q00872 1141 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RAD51Q06609 339 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 BCL2L1Q07817 233 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 FUT7Q11130 342 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 PAFAH1B3Q15102 231 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 ZSWIM7Q19AV6 140 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 KRTAP21-3Q3LHN1 58 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 AGKQ53H12 422 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 DCAF12Q5T6F0 453 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 RIPPLY2Q5TAB7 128 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 LIPJQ5W064 366 aa2.08□□□□□ -2.08
SMARCB1-208ENST00000634926 CES4AQ5XG92 561 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms