RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 C9orf170A2RU37 121 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OOEPA6NGQ2 149 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 BBIP1A8MTZ0 92 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 MRASO14807 208 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CTDSPLO15194 276 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PIAS1O75925 651 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NCR1O76036 304 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CLIC3O95833 236 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 C6orf47O95873 294 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LALBAP00709 142 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LPLP06858 475 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 EPHX1P07099 455 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 IQCF3P0C7M6 154 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 KCNE1P15382 129 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ITGB5P18084 799 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 BCKDHBP21953 392 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PSMB9P28065 219 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ETV6P41212 452 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 VAMP7P51809 220 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NDUFA6P56556 154 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 DPYSL3Q14195 570 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RHEBQ15382 184 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LDLRAD2Q5SZI1 272 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CPTPQ5TA50 214 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LCN8Q6JVE9 175 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 FAM198BQ6UWH4 519 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LINGO4Q6UY18 593 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CXXC5Q7LFL8 322 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 STRADAQ7RTN6 431 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NAXDQ8IW45 347 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR4A16Q8NH70 328 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CYB5D2Q8WUJ1 264 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 KISS1RQ969F8 398 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ALG14Q96F25 216 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 BOD1Q96IK1 185 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 KREMEN1Q96MU8 473 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR52E6Q96RD3 313 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNF300Q96RE9 604 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ACTRT3Q9BYD9 372 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SPRTNQ9H040 489 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NSUN3Q9H649 340 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNF701Q9NV72 531 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 METTL1Q9UBP6 276 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CRLS1Q9UJA2 301 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TRAPPC4Q9Y296 219 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PRAMEF33A0A0G2JMD5 474 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 FAM159BA6NKW6 160 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 MPTX1A8MV57 137 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 M0QXV9 152 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 FZD9O00144 591 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC37A4O43826 429 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 PRAMEF10O60809 474 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 RAD51DO75771 328 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SC5DO75845 299 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 OR2J3O76001 311 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 OR6A2O95222 327 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 DDAH2O95865 285 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 TRUB2O95900 331 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 CEACAM5P06731 702 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 NBEAP1P0C6P0 100 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 KLRK1P26718 216 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 HTR2AP28223 471 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 GRPRP30550 384 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 AKR1C2P52895 323 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 PNLIPRP2P54317 469 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 KIAA0141Q14154 515 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 BSXQ3C1V8 233 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 PLEKHS1Q5SXH7 462 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SYT6Q5T7P8 510 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNF770Q6IQ21 691 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNF613Q6PF04 617 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 FIGLAQ6QHK4 219 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 ARL9Q6T311 187 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 TMEM205Q6UW68 189 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 TMEM179Q6ZVK1 233 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC47A2Q86VL8 602 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNF610Q8N9Z0 462 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 BEND2Q8NDZ0 799 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 DBF4BQ8NFT6 615 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 OR2G2Q8NGZ5 317 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 LMO3Q8TAP4 145 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 FEZF2Q8TBJ5 459 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 RDH11Q8TC12 318 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC22A17Q8WUG5 538 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 UBE2FQ969M7 185 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 FGGYQ96C11 551 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 RPUSD4Q96CM3 377 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 YIPF6Q96EC8 236 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 ZBED6CLQ96FA7 236 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SCRN2Q96FV2 425 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 PERPQ96FX8 193 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 LMLNQ96KR4 655 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 LXNQ9BS40 222 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 ASPNQ9BXN1 380 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC29A3Q9BZD2 475 aa3.6□□□□□ -1.83
R3HDM1-220ENST00000628915 RAB18Q9NP72 206 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms