RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR51A7Q8NH64 312 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ST8SIA1Q92185 356 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 TM9SF4Q92544 642 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 GGHQ92820 318 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 KTI12Q96EK9 354 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 TNFRSF13CQ96RJ3 184 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 HPF1Q9NWY4 346 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 DNAJC27Q9NZQ0 273 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 MED11Q9P086 117 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 NDUFA13Q9P0J0 144 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 GPR52Q9Y2T5 361 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 PCDHGB6Q9Y5F9 930 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 PCDHGB1Q9Y5G3 927 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ETV2O00321 342 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 RGS10O43665 173 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 OR7A10O76100 309 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 CH25HO95992 272 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 MT-ND2P03891 347 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 TSPAN19P0C672 248 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 CCL3P10147 92 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 PRKCAP17252 672 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 JUNBP17275 347 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 C21orf33P30042 268 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 EMX1Q04741 257 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 NEDD8Q15843 81 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 OCLNQ16625 522 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 GXYLT1Q4G148 440 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC6A19Q695T7 634 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 POMZP3Q6PJE2 187 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 LNX2Q8N448 690 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 SIRT6Q8N6T7 355 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 C10orf53Q8N6V4 93 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 WDSUB1Q8N9V3 476 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 TMEM163Q8TC26 289 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 LIPHQ8WWY8 451 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 MYDGFQ969H8 173 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 LRR1Q96L50 414 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 COPS4Q9BT78 406 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 PTDSS2Q9BVG9 487 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 IFT27Q9BW83 186 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 MED17Q9NVC6 651 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNF337Q9Y3M9 751 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 UNC79Q9P2D8 2635 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 NOTCH2Q04721 2471 aa8.58□□□□□ -1.04
PDLIM5-223ENST00000627587 TMED7-TICAM2A0A0A6YYA0 188 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 EFCAB10A6NFE3 127 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SNTNA6NMZ2 147 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 NDUFB2O95178 105 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ASAH2BP0C7U1 165 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 CCNA2P20248 432 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC6A6P31641 620 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 GRK5P34947 590 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 MAP2K4P45985 399 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNF41P51814 821 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SOX8P57073 446 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 RAB39AQ14964 217 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNF74Q16587 644 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 PRAMEF20Q5VT98 475 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 HIST2H2BCQ6DN03 193 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 IGFL3Q6UXB1 125 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 PRSS48Q7RTY5 328 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 MDGA2Q7Z553 956 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 GPR141Q7Z602 305 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SVOPQ8N4V2 548 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 FADS6Q8N9I5 356 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 Q8NA96 180 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 PAQR8Q8TEZ7 354 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 FAR1Q8WVX9 515 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TAAR8Q969N4 342 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 THOC3Q96J01 351 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SGCZQ96LD1 299 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 C5orf34Q96MH7 638 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNF582Q96NG8 517 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 NANSQ9NR45 359 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 CNOT2Q9NZN8 540 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 FBXL2Q9UKC9 423 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 BAIAP2Q9UQB8 552 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 VDAC3Q9Y277 283 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TMED7Q9Y3B3 224 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 RPL36Q9Y3U8 105 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 CEPT1Q9Y6K0 416 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 KIAA1549Q9HCM3 1950 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 CNTRLQ7Z7A1 2325 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TRAV36DV7A0A075B6V5 113 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TMEM72A0PK05 275 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 A6NL46 340 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 KDM4EB2RXH2 506 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 FAM47E-STBD1D6RA91 191 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 MCIDASD6RGH6 385 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 EFNA2O43921 213 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SUSD5O60279 629 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 CDK1P06493 297 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 STSP08842 583 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 UQCRC1P31930 480 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TTKP33981 857 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 GP2P55259 537 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms