RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 CMC2Q9NRP2 79 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 PLEKHA6Q9Y2H5 1048 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 SPAG17Q6Q759 2223 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 OR2AT4A6NND4 320 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 ZNF3P17036 446 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 GUCA2AQ02747 115 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 DUSP2Q05923 314 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 SMCO1Q147U7 214 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 ZNF761Q86XN6 746 aaPredicted RBP13.97□□□□□ -0.17
PMS1-221ENST00000624204 FAM129CQ86XR2 697 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 ZSCAN1Q8NBB4 408 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 ZFP57Q9NU63 452 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 COMMD9Q9P000 198 aa13.97□□□□□ -0.17
PMS1-221ENST00000624204 GPN3Q9UHW5 284 aaPredicted RBP13.97□□□□□ -0.17
PMS1-221ENST00000624204 NOSIPQ9Y314 301 aaKnown RBP13.97□□□□□ -0.17
PMS1-221ENST00000624204 OR6C76A6NM76 312 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 MAS1P04201 325 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 HTR2AP28223 471 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 FRKP42685 505 aaPredicted RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 RPS11P62280 158 aaKnown RBP eCLIP13.96□□□□□ -0.17
PMS1-221ENST00000624204 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 GLB1L2Q8IW92 636 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 EID2Q8N6I1 236 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 SETD7Q8WTS6 366 aaKnown RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 SPSB2Q99619 263 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 GFI1Q99684 422 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 RHBGQ9H310 441 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 DHCR7Q9UBM7 475 aaKnown RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 MIOXQ9UGB7 285 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 LSM7Q9UK45 103 aaKnown RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 ZNF346Q9UL40 294 aaKnown RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 PPIL1Q9Y3C6 166 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 TRAV14DV4A0A0A6YYC5 116 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 PIN1P1O15428 100 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 ASGR1P07306 291 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 MAPK3P27361 379 aaPredicted RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 PPP2CBP62714 309 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 PPP2CAP67775 309 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 OR7A5Q15622 319 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 FRRS1Q6ZNA5 592 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 LRRTM1Q86UE6 522 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 LNX2Q8N448 690 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 NUP43Q8NFH3 380 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 OR4K13Q8NH42 304 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 ADAMTS15Q8TE58 950 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 FARSAQ9Y285 508 aaKnown RBP13.96□□□□□ -0.17
PMS1-221ENST00000624204 SLC35A3Q9Y2D2 325 aa13.96□□□□□ -0.17
PMS1-221ENST00000624204 A0A0D9SG52 128 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 MAN2B1O00754 1011 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 ACTC1P68032 377 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 ACTA1P68133 377 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 SRSF3P84103 164 aaKnown RBP13.96□□□□□ -0.18
PMS1-221ENST00000624204 SCGB2B2Q4G0G5 96 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 CDK20Q8IZL9 346 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 SDR9C7Q8NEX9 313 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 ZNF285Q96NJ3 590 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 ZNF251Q9BRH9 671 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 TSPAN10Q9H1Z9 355 aaPredicted RBP13.96□□□□□ -0.18
PMS1-221ENST00000624204 ANKRD10Q9NXR5 420 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 SPG21Q9NZD8 308 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.18
PMS1-221ENST00000624204 MYO15AQ9UKN7 3530 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 KIF26AQ9ULI4 1882 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 OR5H14A6NHG9 310 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 K7ESM1 405 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 SULT1B1O43704 296 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 DOK2O60496 412 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 DUSP11O75319 330 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 LEFTY1O75610 366 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 RCBTB2O95199 551 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 LATS1O95835 1130 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 ELFN1P0C7U0 828 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 C6P13671 934 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 AGTR1P30556 359 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 DLSTP36957 453 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 ZNF234Q14588 700 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 FAM46CQ5VWP2 391 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 FAM122BQ7Z309 247 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 TMCO2Q7Z6W1 182 aaPredicted RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 PCSK9Q8NBP7 692 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 OR9A2Q8NGT5 310 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 NR4A3Q92570 626 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 TCF7L1Q9HCS4 588 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 SLC25A13Q9UJS0 675 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 ATG4BQ9Y4P1 393 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 IMPA2O14732 288 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 GMFGO60234 142 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 RPS27P42677 84 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 NR0B1P51843 470 aaKnown RBP13.95□□□□□ -0.18
PMS1-221ENST00000624204 RAB5BP61020 215 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 PLA2G7Q13093 441 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 CLINT1Q14677 625 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 MORN1Q5T089 497 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 WDR88Q6ZMY6 472 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 STEAP2Q8NFT2 490 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 OR52E2Q8NGJ4 325 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 TMEM239Q8WW34 195 aa13.95□□□□□ -0.18
PMS1-221ENST00000624204 OVCA2Q8WZ82 227 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms