RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 SOCS6O14544 535 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 SOX6P35712 828 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 ETV5P41161 510 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 LIMK1P53667 647 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 EGR4Q05215 589 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 MED22Q15528 200 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 GXYLT1Q4G148 440 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 B3GLCTQ6Y288 498 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 CPOQ8IVL8 374 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 OR4M1Q8NGD0 313 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 OR5M3Q8NGP4 307 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 RNFT2Q96EX2 444 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 CEP19Q96LK0 163 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 TAPBPLQ9BX59 468 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 ULBP3Q9BZM4 244 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 KCNN2Q9H2S1 579 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 TIGARQ9NQ88 270 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 NPFFR2Q9Y5X5 522 aa16.82■□□□□ 0.28
PCDHB2-202ENST00000622947 TRBV11-1A0A0K0K1C0 115 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 WWP2O00308 870 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 HCRTR2O43614 444 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 CSO75390 466 aaKnown RBP16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 RCBTB2O95199 551 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 HSMCR30P0CW71 290 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 BMP7P18075 431 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 LCN1P31025 176 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 EVI2BP34910 448 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 ETV1P50549 477 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 CD83Q01151 205 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 FOXK2Q01167 660 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 RNLSQ5VYX0 342 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 OR52L1Q8NGH7 329 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 CCDC120Q96HB5 630 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 MGLLQ99685 303 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 MED17Q9NVC6 651 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 GLTPQ9NZD2 209 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 B3GALT1Q9Y5Z6 326 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 A0A1W2PQD3 144 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 KLF7O75840 302 aaPredicted RBP16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 PDGFAP04085 211 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 UMODP07911 640 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 PRKACAP17612 351 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 MTNR1AP48039 350 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 FBXW4P57775 412 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 SLC26A5P58743 744 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 TIGD3Q6B0B8 471 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 C19orf48Q6RUI8 117 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 LPAR4Q99677 370 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 IFT27Q9BW83 186 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 NIPAL2Q9H841 368 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 DIMT1Q9UNQ2 313 aaKnown RBP16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 ZNF318Q5VUA4 2279 aa16.81■□□□□ 0.28
PCDHB2-202ENST00000622947 ZC3H12DA2A288 527 aaKnown RBP16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 HCN1O60741 890 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 PPP1R3DO95685 299 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 HMGN1P05114 100 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 GZMKP49863 264 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 CDH11P55287 796 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 SOWAHCQ53LP3 525 aaPredicted RBP16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 PLBD1Q6P4A8 553 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 NANOGP1Q8N7R0 232 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 LHFPL5Q8TAF8 219 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 NUBPLQ8TB37 319 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 PTP4A1Q93096 173 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 MR1Q95460 341 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 SGTBQ96EQ0 304 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 OPALINQ96PE5 141 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 PRRG3Q9BZD7 231 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 TBL1XR1Q9BZK7 514 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 ADAM19Q9H013 955 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 OR51E2Q9H255 320 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 WDR54Q9H977 334 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 LIN7BQ9HAP6 207 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 SLC39A1Q9NY26 324 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 ZMAT5Q9UDW3 170 aaKnown RBP16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 CCKBRP32239 447 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 SSX1Q16384 188 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 OR4F15Q8NGB8 312 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 KLHL21Q9UJP4 597 aa16.8■□□□□ 0.28
PCDHB2-202ENST00000622947 CPAMD8Q8IZJ3 1885 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 LOC100506127A0A0U1RQW1 187 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 CCDC182A6NF36 153 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 PPM1BO75688 479 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 RAB36O95755 333 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 SLC1A3P43003 542 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 TSTQ16762 297 aaKnown RBP16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 RPL13AP3Q6NVV1 102 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 CXXC5Q7LFL8 322 aaKnown RBP16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 ATCAYQ86WG3 371 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 CYP4Z2PQ8N1L4 340 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 LRFN5Q96NI6 719 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 MOGAT1Q96PD6 335 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 BEX2Q9BXY8 128 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 FGF20Q9NP95 211 aaPredicted RBP16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 CMC2Q9NRP2 79 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 FBXL4Q9UKA2 621 aa16.79■□□□□ 0.28
PCDHB2-202ENST00000622947 C2orf72A6NCS6 295 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms