RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF829Q3KNS6 432 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-229ENST00000622668 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 XKR7Q5GH72 579 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 ATAD3CQ5T2N8 411 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 HACD2Q6Y1H2 254 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF574Q6ZN55 896 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-229ENST00000622668 OR8J1Q8NGP2 316 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 NUBPLQ8TB37 319 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 FNDC9Q8TBE3 224 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 GPR119Q8TDV5 335 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 MZB1Q8WU39 189 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 ASB5Q8WWX0 329 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 LAT2Q9GZY6 243 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 PCDHGA3Q9Y5H0 932 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 C9orf172C9J069 976 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 PRSS44E7EML9 344 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 CT62P0C5K7 136 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 HSD17B1P14061 328 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 CCNIQ14094 377 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 NHSL2Q5HYW2 709 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 ESPNLQ6ZVH7 1005 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 AMER2Q8N7J2 671 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 HOXB13Q92826 284 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-229ENST00000622668 NINJ1Q92982 152 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 ZBTB8AQ96BR9 441 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 SYT4Q9H2B2 425 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 TNFRSF12AQ9NP84 129 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 MED17Q9NVC6 651 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 HRH3Q9Y5N1 445 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 IGHV3-64DA0A0J9YX35 117 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 A0A1W2PR80 420 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 TCRBV16S1A1N1A0A5B0 115 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 LINC01387J3KSC0 135 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 PRODHO43272 600 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 CTSBP07858 339 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 TMEM225BP0DP42 221 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 NR4A1P22736 598 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 IL12AP29459 219 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 FABP6P51161 128 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 DUSP8Q13202 625 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 KEAP1Q14145 624 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 RAB35Q15286 201 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 MOGQ16653 247 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 NKAPLQ5M9Q1 402 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 TMEM236Q5W0B7 351 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 FAM219BQ5XKK7 198 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 PDSS2Q86YH6 399 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 FN3KQ9H479 309 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 MMP25Q9NPA2 562 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 MCUBQ9NWR8 336 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 KLHL21Q9UJP4 597 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 USP22Q9UPT9 525 aa8.29□□□□□ -1.08
HDAC9-229ENST00000622668 LOC100130705A0A1B0GUX0 176 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 A0A1W2PPK0 400 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 C1QTNF9BB2RNN3 333 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 HMGN4O00479 90 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 C1QTNF9P0C862 333 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 EDN3P14138 238 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 CELP19835 753 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 GABRA2P47869 451 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 BCL2L15Q5TBC7 163 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TMEM99Q8N816 258 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 OR11L1Q8NGX0 322 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TIMD4Q96H15 378 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 INTS14Q96SY0 518 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TMED9Q9BVK6 235 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 EGLN1Q9GZT9 426 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TP63Q9H3D4 680 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-229ENST00000622668 MED29Q9NX70 200 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TAS2R7Q9NYW3 318 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
HDAC9-229ENST00000622668 PCM1Q15154 2024 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 MED26O95402 600 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 CLIC3O95833 236 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 SRD5A2P31213 254 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 RPS23P62266 143 aaKnown RBP8.28□□□□□ -1.08
HDAC9-229ENST00000622668 COL19A1Q14993 1142 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 ARMCX4Q5H9R4 360 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 CCDC71Q8IV32 467 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-229ENST00000622668 ACBD7Q8N6N7 88 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF321PQ8N8H1 164 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 PIGCQ92535 297 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TSC22D3Q99576 134 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
HDAC9-229ENST00000622668 OR10A2Q9H208 303 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TOR3AQ9H497 397 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 EVA1AQ9H8M9 152 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 HRKO00198 91 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 SYT7O43581 403 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF83P51522 516 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 ALDH3A2P51648 485 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 DUSP7Q16829 419 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 TBC1D28Q2M2D7 210 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 OR7E24Q6IFN5 339 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 KBTBD8Q8NFY9 601 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 FNDC8Q8TC99 324 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 ING4Q9UNL4 249 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 DHDHQ9UQ10 334 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 CDH10Q9Y6N8 788 aa8.28□□□□□ -1.08
HDAC9-229ENST00000622668 FAM157BP0CG42 384 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms