RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	SERPINA3	P01011	423 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	GRPR	P30550	384 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	CBFB	Q13951	182 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR1Q1	Q15612	314 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	EIPR1	Q53HC9	387 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	KCT2	Q8NC54	265 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZCCHC10	Q8TBK6	192 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	DUSP19	Q8WTR2	217 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ADGRL4	Q9HBW9	690 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	PLXNA2	O75051	1894 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	CENPVL1	A0A0U1RR11	272 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	KLF4	O43474	513 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	MOSPD3	O75425	235 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	CPN1	P15169	458 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	CBR1	P16152	277 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	NT5E	P21589	574 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	CDK2	P24941	298 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	RAB13	P51153	203 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	LUM	P51884	338 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	MFSD12	Q6NUT3	480 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	NAXD	Q8IW45	347 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	PM20D2	Q8IYS1	436 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	PUSL1	Q8N0Z8	303 aa	Known RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR5T2	Q8NGG2	359 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR4D10	Q8NGI6	311 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR8S1	Q8NH09	359 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	CHST6	Q9GZX3	395 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	C1QTNF3-AMACR	E9PGA6	284 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	SC5D	O75845	299 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CISD3	P0C7P0	127 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	P2RY2	P41231	377 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	DUSP5	Q16690	384 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	SWI5	Q1ZZU3	235 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	SLC16A13	Q7RTY0	426 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	LRRC25	Q8N386	305 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	DNAAF1	Q8NEP3	725 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR2AK2	Q8NG84	335 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF559	Q9BR84	538 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	MENT	Q9BUN1	341 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CMC2	Q9NRP2	79 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	INPP5E	Q9NRR6	644 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	SLC35A3	Q9Y2D2	325 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	MRPS23	Q9Y3D9	190 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	TCF20	Q9UGU0	1960 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	SPTB	P11277	2137 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	VIPR2	P41587	438 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	WAS	P42768	502 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	POLR2G	P62487	172 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	MLF2	Q15773	248 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	MRPL2	Q5T653	305 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZC3H14	Q6PJT7	736 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	TSSK4	Q6SA08	328 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	LNX2	Q8N448	690 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CLDND1	Q9NY35	253 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	ST6GALNAC2	Q9UJ37	374 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	TBC1D3K	A0A087X1G2	549 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	MPTX1	A8MV57	137 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	BHLHE40	O14503	412 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	GNB5	O14775	395 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	NDUFB6	O95139	128 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	APOC1	P02654	83 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	ACR	P10323	421 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CALCR	P30988	508 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	SOX2	P48431	317 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	PTH2R	P49190	550 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CSRP2	Q16527	193 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	NDUFAF6	Q330K2	333 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	PCGF3	Q3KNV8	242 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	TBC1D3G	Q6DHY5	549 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	FIGNL1	Q6PIW4	674 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	TMEM17	Q86X19	198 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	LDLRAD3	Q86YD5	345 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR52E1	Q8NGJ3	308 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	DVL3	Q92997	716 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	S100A16	Q96FQ6	103 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	MS4A4E	Q96PG1	132 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	GAL3ST1	Q99999	423 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF471	Q9BX82	626 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	WDR13	Q9H1Z4	485 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	ASF1B	Q9NVP2	202 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CTSF	Q9UBX1	484 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	APOBEC3B	Q9UH17	382 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	CES1P1	Q9UKY3	287 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	PLEKHM1	Q9Y4G2	1056 aa		13.22	□□□□□ -0.29
SYNRG-231	ENST00000622045	NAP1L6	A6NFF2	107 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF234	Q14588	700 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	HFE	Q30201	348 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	ELFN2	Q5R3F8	820 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	MRM1	Q6IN84	353 aa	Known RBP	13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	BAIAP2L2	Q6UXY1	529 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	WDR88	Q6ZMY6	472 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	SFTPA1	Q8IWL2	248 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	PELI1	Q96FA3	418 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	TRPM6	Q9BX84	2022 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	ANKRD20A5P	A0PJZ0	165 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	HMSD	A8MTL9	139 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	AGR2	O95994	175 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms