RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 C1orf140Q5VVS0 124 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 CYB5R2Q6BCY4 276 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 NXNQ6DKJ4 435 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 CREB3L2Q70SY1 520 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 LINGO2Q7L985 606 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 SERPINA11Q86U17 422 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 TMEM158Q8WZ71 300 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 C3orf49Q96BT1 292 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 TMEM19Q96HH6 336 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 SORCS2Q96PQ0 1159 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 SLC38A2Q96QD8 506 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 TPT1P8Q9HAU6 139 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 THAP1Q9NVV9 213 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 PRDM4Q9UKN5 801 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 TMEM229AB2RXF0 380 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 ZNF587BE7ETH6 402 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 PHF1O43189 567 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 NPIPB7O75200 414 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 VAMP5O95183 116 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 ANP32DO95626 131 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 IDO1P14902 403 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 NCF2P19878 526 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 PRAMEF8Q5VWM4 474 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 PRAMEF7Q5VXH5 474 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 NIPAL3Q6P499 406 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 EPHX4Q8IUS5 362 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 VPS33AQ96AX1 596 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 MAELQ96JY0 434 aaKnown RBP18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 BEX2Q9BXY8 128 aa18.1■□□□□ 0.49
TRAPPC3-208ENST00000616074 VWC2LB2RUY7 222 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 NR5A2O00482 541 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 UPK3AO75631 287 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 ZCCHC18P0CG32 403 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 SNRPD2P62316 118 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 TUBA1BP68363 451 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 TUBA4AP68366 448 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 LSM11P83369 360 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 LARS2Q15031 903 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 SLC9B1Q4ZJI4 515 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 TUBA1AQ71U36 451 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 MGARPQ8TDB4 240 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 BCL2L2Q92843 193 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 SPATA9Q9BWV2 254 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 NELFAQ9H3P2 528 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 RASD1Q9Y272 281 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 FKBP7Q9Y680 259 aa18.09■□□□□ 0.49
TRAPPC3-208ENST00000616074 A0A096LPI6 279 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 ARPC4-TTLL3A0A0A6YYG9 625 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 A0A0G2JPF8 293 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 TMEM120BA0PK00 339 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 HNRNPCL2B2RXH8 293 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 HNRNPCL3B7ZW38 293 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 FTCDNL1E5RQL4 147 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 HNRNPCL1O60812 293 aaKnown RBP18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 HNRNPCL4P0DMR1 293 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 PDLIM4P50479 330 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 UBE2NP61088 152 aaKnown RBP18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 GGTLC2Q14390 218 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZSWIM7Q19AV6 140 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 MAVSQ7Z434 540 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 KDM8Q8N371 416 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 ARIH2OSQ8N7S6 290 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 OR9I1Q8NGQ6 314 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 STK35Q8TDR2 534 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 ITCHQ96J02 903 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 KCNS3Q9BQ31 491 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 KATNB1Q9BVA0 655 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 PTDSS2Q9BVG9 487 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 RMND5AQ9H871 391 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 CA10Q9NS85 328 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZIM2Q9NZV7 527 aa18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 CRNNQ9UBG3 495 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC3-208ENST00000616074 A0A096LPE4 126 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 A0A1W2PPZ6 126 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 OR6C65A6NJZ3 312 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLCO1B7G3V0H7 640 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 AHSA1O95433 338 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 CRYAAP02489 173 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 NUDT7P0C024 238 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 CECR9P0C854 216 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 PNMTP11086 282 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SERPINF1P36955 418 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 HOXC5Q00444 222 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 NAAAQ02083 359 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 EGR4Q05215 589 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 ZNF311Q5JNZ3 666 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 ATG16L1Q676U5 607 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 MSANTD1Q6ZTZ1 278 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 ANKS4BQ8N8V4 417 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 MFSD8Q8NHS3 518 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SLC25A36Q96CQ1 311 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 PIMREGQ9BSJ6 248 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 LINC00470Q9BZP3 86 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SHARPINQ9H0F6 387 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SEC61A2Q9H9S3 476 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 CACYBPQ9HB71 228 aaKnown RBP18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SDR39U1Q9NRG7 319 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 LPAR3Q9UBY5 353 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 SEC14L4Q9UDX3 406 aa18.07■□□□□ 0.48
TRAPPC3-208ENST00000616074 RAB21Q9UL25 225 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms