RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SLC38A1Q9H2H9 487 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 NOX4Q9NPH5 578 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 A0A1W2PPC4 97 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CRTAPO75718 401 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SYNGR4O95473 234 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CPEP16870 476 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 RBMS1P29558 406 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 RPS27P42677 84 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 LSSP48449 732 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 PSPHP78330 225 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 DUSP2Q05923 314 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 HTR4Q13639 388 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 DNAAF1Q8NEP3 725 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 BRIX1Q8TDN6 353 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SENP5Q96HI0 755 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SYT4Q9H2B2 425 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 GPATCH2Q9NW75 528 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 NDUFB11Q9NX14 153 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 SUSD2Q9UGT4 822 aa8.22□□□□□ -1.09
PDLIM5-222ENST00000615540 CAPZBP47756 277 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 FABP5Q01469 135 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 CHRFAM7AQ494W8 412 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 PDSS1Q5T2R2 415 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 BAIAP2L2Q6UXY1 529 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 LRRC69Q6ZNQ3 347 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 OR4C15Q8NGM1 316 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 OR4Q3Q8NH05 313 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 DYNC2LI1Q8TCX1 351 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 DEDD2Q8WXF8 326 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 HSD17B8Q92506 261 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 NXPE2Q96DL1 559 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 NAA11Q9BSU3 229 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 MED17Q9NVC6 651 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF281Q9Y2X9 895 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 KLK4Q9Y5K2 254 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 SERTM1A2A2V5 107 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 SPINT1O43278 529 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 GPANK1O95872 356 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 CYB5AP00167 134 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 AMY2AP04746 511 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 NUDT1P36639 197 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 DCDP81605 110 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 SF3A2Q15428 464 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 PYHIN1Q6K0P9 492 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 DPY19L4Q7Z388 723 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 TSSK2Q96PF2 358 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 V9GY05 133 aa8.21□□□□□ -1.09
PDLIM5-222ENST00000615540 DNAJB6O75190 326 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 HBQ1P09105 142 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 ARSBP15848 533 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 GLO1Q04760 184 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 FZD2Q14332 565 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 MEP1BQ16820 701 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 NIPAL3Q6P499 406 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 IQCF2Q8IXL9 164 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 IL22RA1Q8N6P7 574 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 OR51T1Q8NGJ9 327 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 DUSP23Q9BVJ7 150 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 C14orf166Q9Y224 244 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 TRPM7Q96QT4 1865 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 CT62P0C5K7 136 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 PCMT1P22061 227 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 GDF1P27539 372 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 CRABP1P29762 137 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 SSTR2P30874 369 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 CCR6P51684 374 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 SIRPAP78324 504 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 LTBQ06643 244 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 DPY19L2P2Q6ZN68 376 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM57BQ71RH2 274 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 IFI44Q8TCB0 444 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC25A46Q96AG3 418 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 WDR34Q96EX3 536 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 GIMAP5Q96F15 307 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 Q96M85 177 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 TEAD3Q99594 435 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 INPP5EQ9NRR6 644 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 C20orf141Q9NUB4 165 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A1B0GX78 115 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 SHISA8B8ZZ34 492 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 TSPAN4O14817 238 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 NID1P14543 1247 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 CFAP77Q6ZQR2 320 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 KIF18BQ86Y91 864 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 GPR137CQ8N3F9 429 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 OR4M1Q8NGD0 313 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 GPR148Q8TDV2 347 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 ARHGDIGQ99819 225 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 ST6GALNAC5Q9BVH7 336 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC52A3Q9NQ40 469 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 MAN2C1Q9NTJ4 1040 aa8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 ING1Q9UK53 422 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-222ENST00000615540 LILRB5O75023 590 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 PIPP12273 146 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ANXA3P12429 323 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 AMY2BP19961 511 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 GZMMP51124 257 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 CLDN17P56750 224 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 EEF1A1P68104 462 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms