RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GCGRP47871 477 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 RPS25P62851 125 aaKnown RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 SERTAD2Q14140 314 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 HES3Q5TGS1 186 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 RDH10Q8IZV5 341 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 OR4K5Q8NGD3 323 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 TM4SF18Q96CE8 201 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 LRR1Q96L50 414 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 THAP7Q9BT49 309 aaPredicted RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 PLEKHA1Q9HB21 404 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 MGAT4CQ9UBM8 478 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 V9GYH0 126 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 PRSS44E7EML9 344 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 H0YIV9 168 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 J3QLW9 94 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF19P17023 458 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 PVALBP20472 110 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 PTPN6P29350 595 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 GBX2P52951 348 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 SIRPAP78324 504 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 GABREP78334 506 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 SLC3A1Q07837 685 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 RIN1Q13671 783 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 HYAL4Q2M3T9 481 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
FAM3A-221ENST00000612856 MFSD9Q8NBP5 474 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 OR4M2Q8NGB6 313 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 OR6N2Q8NGY6 317 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 DDOQ99489 341 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 TREX2Q9BQ50 279 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 PDCD10Q9BUL8 212 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 RBM24Q9BX46 236 aaKnown RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 DAPL1A0PJW8 107 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF98A6NK75 572 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF670-ZNF695F2Z2N8 137 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 DOK2O60496 412 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 F13BP05160 661 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 NAGAP17050 411 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 NXPH1P58417 271 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 SSX1Q16384 188 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF791Q3KP31 576 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 ZC3HAV1Q7Z2W4 902 aaKnown RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 LSRQ86X29 649 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 MS4A15Q8N5U1 240 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 CDRT4Q8N9R6 151 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 RNF170Q96K19 258 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF578Q96N58 590 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 OR7D2Q96RA2 312 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 BHLHE41Q9C0J9 482 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 SLC6A20Q9NP91 592 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 PCDHGA9Q9Y5G4 932 aaKnown RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 A0A0B4J293 547 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 A0A1B0GX78 115 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 A0A1W2PS29 197 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 FCMRO60667 390 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 PRAMEF4O60810 478 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 CBX7O95931 251 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 TPOP07202 933 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 SPARCP09486 303 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF28P17035 718 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 EPHA8P29322 1005 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 AHRP35869 848 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 TRIM23P36406 574 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ETV6P41212 452 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 SNTB2Q13425 540 aaKnown RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 OPCMLQ14982 345 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 ZXDCQ2QGD7 858 aaPredicted RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 COL28A1Q2UY09 1125 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 PRAMEF9Q5VWM5 478 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 LINGO2Q7L985 606 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 NANPQ8TBE9 248 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 FANK1Q8TC84 345 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 CCDC115Q96NT0 180 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 G6PC3Q9BUM1 346 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 OR10A5Q9H207 317 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 MED11Q9P086 117 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 UPB1Q9UBR1 384 aa10□□□□□ -0.81
FAM3A-221ENST00000612856 RBM7Q9Y580 266 aaKnown RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 TLN1Q9Y490 2541 aaKnown RBP10□□□□□ -0.81
FAM3A-221ENST00000612856 IGHV1OR21-1A0A087WYE8 117 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TRBV5-4A0A0C4DH59 114 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 hCG_1807616A0A1W2PRN6 198 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 GXYLT2A0PJZ3 443 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 NPIPA2E9PIF3 369 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 NPIPA3F8WFD2 350 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 PROM1O43490 865 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 BRINP1O60477 761 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 MPZL2O60487 215 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZFAND5O76080 213 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 AGR2O95994 175 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 MT-ND4P03905 459 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 HBQ1P09105 142 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 H2AFB2P0C5Z0 115 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CXCL3P19876 107 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 LIM2P55344 173 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 OR12D2P58182 307 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 EEF1A1P68104 462 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TMEM176BQ3YBM2 270 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 PRAMEF8Q5VWM4 474 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 PRAMEF7Q5VXH5 474 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms