RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ERMAPQ96PL5 475 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-207ENST00000612558 GPX7Q96SL4 187 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-207ENST00000612558 ANGPTL4Q9BY76 406 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 PTGES2Q9H7Z7 377 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 FKRPQ9H9S5 495 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 SH2D2AQ9NP31 389 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 NRIP3Q9NQ35 241 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 HINT3Q9NQE9 182 aaKnown RBP8.07□□□□□ -1.12
CCDC47-207ENST00000612558 CHRNA9Q9UGM1 479 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 MRPS18BQ9Y676 258 aaKnown RBP8.07□□□□□ -1.12
CCDC47-207ENST00000612558 COMMD3-BMI1R4GMX3 469 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 EML6Q6ZMW3 1958 aa8.07□□□□□ -1.12
CCDC47-207ENST00000612558 ANKRD33BA6NCL7 494 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 FAM47E-STBD1D6RA91 191 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 MCIDASD6RGH6 385 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PRR23D1E9PI22 279 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 BLOC1S5-TXNDC5H3BN57 136 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 OR2T1O43869 369 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 WISP1O95388 367 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 RAB36O95755 333 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 BGLAPP02818 100 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 TSPAN19P0C672 248 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PRR23D2P0DMB1 279 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ZNF3P17036 446 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PAICSP22234 425 aaKnown RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PSMB9P28065 219 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 HTR1FP30939 366 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 TMBIM6P55061 237 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ITGADQ13349 1161 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ATP1A4Q13733 1029 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PLPPR5Q32ZL2 321 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ACER2Q5QJU3 275 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 FAM69AQ5T7M9 428 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PRAMEF20Q5VT98 475 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 PLBD1Q6P4A8 553 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 MAMDC2Q7Z304 686 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 MARCH9Q86YJ5 346 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 GPALPP1Q8IXQ4 340 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 FADS6Q8N9I5 356 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 WDSUB1Q8N9V3 476 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 OR52I1Q8NGK6 324 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 OR6S1Q8NH40 331 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ADAMTS14Q8WXS8 1223 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 KIAA1143Q96AT1 154 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 OTULINQ96BN8 352 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ISOC1Q96CN7 298 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 NTNG2Q96CW9 530 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 NMD3Q96D46 503 aaKnown RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 LGALS12Q96DT0 336 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 RNFT2Q96EX2 444 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 THOC3Q96J01 351 aaKnown RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 MRGPRX4Q96LA9 322 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 DOK1Q99704 481 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 TAPBPLQ9BX59 468 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ZFP64Q9NPA5 681 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 WARS2Q9UGM6 360 aaKnown RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 IL17BQ9UHF5 180 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 KLHL21Q9UJP4 597 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 DIMT1Q9UNQ2 313 aaKnown RBP8.06□□□□□ -1.12
CCDC47-207ENST00000612558 VDAC3Q9Y277 283 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ERGIC3Q9Y282 383 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 SLC6A5Q9Y345 797 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 IER3IP1Q9Y5U9 82 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 CFAP54Q96N23 3096 aa8.06□□□□□ -1.12
CCDC47-207ENST00000612558 ZC3H12DA2A288 527 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 FAM183AA6NL82 134 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CDK2AP1O14519 115 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ZNF208O43345 1280 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 NOL3O60936 208 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SNX4O95219 450 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 AHSA1O95433 338 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 LCKP06239 509 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ADRA2AP08913 450 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ADORA3P0DMS8 318 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 CCL3P10147 92 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 APEHP13798 732 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 GSTT1P30711 240 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 UQCRC1P31930 480 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 AQP2P41181 271 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 EIF1P41567 113 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 NOVA1P51513 510 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 TMED1Q13445 227 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 MFSD13AQ14CX5 517 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ALG10Q5BKT4 473 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 DCAF10Q5QP82 559 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ARMC4Q5T2S8 1044 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 C1orf140Q5VVS0 124 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 C1QL3Q5VWW1 255 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 B3GNTL1Q67FW5 361 aaPredicted RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 MEPCEQ7L2J0 689 aaKnown RBP8.05□□□□□ -1.12
CCDC47-207ENST00000612558 ASCL5Q7RTU5 278 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 TMPRSS7Q7RTY8 843 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 NANOGNBQ7Z5D8 188 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 PLCZ1Q86YW0 608 aa8.05□□□□□ -1.12
CCDC47-207ENST00000612558 SIRT6Q8N6T7 355 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms