RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 BTG1P62324 171 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RAB11BQ15907 218 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SLC18B1Q6NT16 456 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MED25Q71SY5 747 aa8□□□□□ -1.13
LIG4-204ENST00000611712 DPY19L4Q7Z388 723 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RASGRP3Q8IV61 690 aa8□□□□□ -1.13
LIG4-204ENST00000611712 CA13Q8N1Q1 262 aa8□□□□□ -1.13
LIG4-204ENST00000611712 OR4N2Q8NGD1 307 aa8□□□□□ -1.13
LIG4-204ENST00000611712 COQ8AQ8NI60 647 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF417Q8TAU3 575 aa8□□□□□ -1.13
LIG4-204ENST00000611712 GIMAP5Q96F15 307 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NOX3Q9HBY0 568 aa8□□□□□ -1.13
LIG4-204ENST00000611712 KLRF1Q9NZS2 232 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RABL2AQ9UBK7 228 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 FBXL4Q9UKA2 621 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RABL2BQ9UNT1 228 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MRPS2Q9Y399 296 aaKnown RBP8□□□□□ -1.13
LIG4-204ENST00000611712 CPED1A4D0V7 1026 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 OR5K3A6NET4 321 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ZNF264O43296 627 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 AKR7A2O43488 359 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PEX14O75381 377 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 CYB5AP00167 134 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ALDOBP05062 364 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ERGP11308 486 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 SRMP19623 302 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 FBLP22087 321 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 RBM34P42696 430 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 EMDP50402 254 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 POU4F3Q15319 338 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 HYAL4Q2M3T9 481 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 DEFB133Q30KQ1 61 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 UBE2NLQ5JXB2 153 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 OLFML2AQ68BL7 652 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 RCBTB1Q8NDN9 531 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 OR2AJ1Q8NGZ0 328 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ZFAND1Q8TCF1 268 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PCNPQ8WW12 178 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 MYEF2Q9P2K5 600 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 SCP2D1Q9UJQ7 156 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PRAF2O60831 178 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 EML2O95834 649 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 CD14P08571 375 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ZNF20P17024 532 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 TACR3P29371 465 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PRSS3P35030 304 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ATXN7L3Q14CW9 347 aaPredicted RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 PRAMEF17Q5VTA0 474 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PEG10Q86TG7 708 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 TMEM234Q8WY98 164 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PMM1Q92871 262 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ORAI1Q96D31 301 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ZNF681Q96N22 645 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 RBP7Q96R05 134 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 CYSLTR2Q9NS75 346 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 MKL2Q9ULH7 1088 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 MRPS17Q9Y2R5 130 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 CACNA1IQ9P0X4 2223 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 PLXNA3P51805 1871 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ALPK2Q86TB3 2170 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 DCDC2BA2VCK2 349 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 E9PI62 339 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 SLC16A7O60669 478 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 KDM4BO94953 1096 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ATP1B1P05026 303 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 CD53P19397 219 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 BTG2P78543 158 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 FUT5Q11128 374 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 FAM109BQ6ICB4 259 aaPredicted RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 KIRREL2Q6UWL6 708 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 TMPRSS11FQ6ZWK6 438 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 KCTD20Q7Z5Y7 419 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 TMEM106AQ96A25 262 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 SENP5Q96HI0 755 aaPredicted RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 MRI1Q9BV20 369 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 POTEKPQ9BYX7 375 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 TAS2R8Q9NYW2 309 aa7.99□□□□□ -1.13
LIG4-204ENST00000611712 ATXN7L1Q9ULK2 861 aaPredicted RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 EXOGQ9Y2C4 368 aaKnown RBP7.99□□□□□ -1.13
LIG4-204ENST00000611712 C5orf51A6NDU8 294 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ANKRD61A6NGH8 418 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 PHYHO14832 338 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 PLA2G10O15496 165 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 LINC01565O15544 149 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 OR7A10O76100 309 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 RAB40ALP0C0E4 278 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 H2BFMP0C1H6 154 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
LIG4-204ENST00000611712 PBX2P40425 430 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SQSTM1Q13501 440 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 CDK5R1Q15078 307 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 GLYR1Q49A26 553 aaPredicted RBP7.98□□□□□ -1.13
LIG4-204ENST00000611712 LRRC37A5PQ49AS3 106 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SHISA6Q6ZSJ9 500 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 CREB3L2Q70SY1 520 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 COMTD1Q86VU5 262 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ARMC10Q8N2F6 343 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 RAB40AQ8WXH6 277 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms