RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 VAMP5O95183 116 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 ANP32DO95626 131 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 LGI1O95970 557 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 IL6P05231 212 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 BCHEP06276 602 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 ZNF16P17020 682 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 NCF2P19878 526 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 CRISP3P54108 245 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 DSTNP60981 165 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 GGTLC2Q14390 218 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 NIPAL3Q6P499 406 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 ANKRD16Q6P6B7 361 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 LINGO2Q7L985 606 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 EPHX4Q8IUS5 362 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 KDM8Q8N371 416 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 SLC38A5Q8WUX1 472 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 VRK1Q99986 396 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 KCNS3Q9BQ31 491 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 TPT1P8Q9HAU6 139 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 OBP2BQ9NPH6 170 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 ZNF443Q9Y2A4 671 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 CHST2Q9Y4C5 530 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 A0A0G2JPF8 293 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 HNRNPCL2B2RXH8 293 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 HNRNPCL3B7ZW38 293 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 FRS3O43559 492 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 HNRNPCL1O60812 293 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 NPIPB7O75200 414 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 UPK3AO75631 287 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 CRYAAP02489 173 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 HNRNPCL4P0DMR1 293 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 SERPINF1P36955 418 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 NR4A2P43354 598 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 GZMKP49863 264 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 UBE2NP61088 152 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 TUBA1BP68363 451 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 TUBA4AP68366 448 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 LARS2Q15031 903 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 CARTPTQ16568 116 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 GTDC1Q4AE62 458 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 PDCD4Q53EL6 469 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 RPS26P11Q5JNZ5 115 aaPredicted RBP11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 PRAMEF8Q5VWM4 474 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 PRAMEF7Q5VXH5 474 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 TUBA1AQ71U36 451 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 SERPINA11Q86U17 422 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 ANKS4BQ8N8V4 417 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 STK35Q8TDR2 534 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 C3orf49Q96BT1 292 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 SLC25A36Q96CQ1 311 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 TMEM19Q96HH6 336 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 PRR14Q9BWN1 585 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 SPATA9Q9BWV2 254 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 CA10Q9NS85 328 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 THAP1Q9NVV9 213 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 FKBP7Q9Y680 259 aa11.65□□□□□ -0.54
POLR2J3-219ENST00000608621 A0A096LPE4 126 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 A0A096LPI6 279 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 ARPC4-TTLL3A0A0A6YYG9 625 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 OR6C65A6NJZ3 312 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 B9A039 149 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 NDUFS8O00217 210 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 SNNO75324 88 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 AHSA1O95433 338 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 IDO1P14902 403 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 PAX7P23759 505 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 CLDN17P56750 224 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 SNRPD2P62316 118 aaKnown RBP11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 HOXC5Q00444 222 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 NAAAQ02083 359 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 SLC9B1Q4ZJI4 515 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 VHLLQ6RSH7 139 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 MFSD8Q8NHS3 518 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 ALKBH3Q96Q83 286 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 KATNB1Q9BVA0 655 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 LINC00470Q9BZP3 86 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 ARMC7Q9H6L4 198 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 CRNNQ9UBG3 495 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 IFT52Q9Y366 437 aa11.64□□□□□ -0.55
POLR2J3-219ENST00000608621 LOC100289279A0A1B0GTE1 492 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 LOC390937A0A1W2PQ73 354 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 TMEM229AB2RXF0 380 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 FTCDNL1E5RQL4 147 aa11.63□□□□□ -0.55
POLR2J3-219ENST00000608621 SLCO1B7G3V0H7 640 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms