RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	CHI3L2	Q15782	390 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	CR1L	Q2VPA4	569 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	SLC46A3	Q7Z3Q1	461 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	GPAT4	Q86UL3	456 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	ZNF540	Q8NDQ6	660 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	LINC00470	Q9BZP3	86 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	MEAF6	Q9HAF1	191 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	CHST2	Q9Y4C5	530 aa		18.24	■□□□□ 0.51
NECAB3-222	ENST00000607805	OR6C65	A6NJZ3	312 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805		A8MVM7	634 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	FTCDNL1	E5RQL4	147 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	BIRC5	O15392	142 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	LILRA1	O75019	489 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	UPK3A	O75631	287 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	STAMBP	O95630	424 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	PGR	P06401	933 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	IGFBP1	P08833	259 aa	Predicted RBP	18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	HOXB1	P14653	301 aa	Predicted RBP	18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	IDH3G	P51553	393 aa	Predicted RBP	18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	SQLE	Q14534	574 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	TMEM225	Q6GV28	225 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	WBP2NL	Q6ICG8	309 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	ZNF836	Q6ZNA1	936 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	SPATA19	Q7Z5L4	167 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	MYPOP	Q86VE0	399 aa	Predicted RBP	18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	TRIML2	Q8N7C3	387 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	NUP37	Q8NFH4	326 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	ALKBH3	Q96Q83	286 aa	Predicted RBP	18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	PANX1	Q96RD7	426 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	TMEM109	Q9BVC6	243 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	NUF2	Q9BZD4	464 aa		18.23	■□□□□ 0.51
NECAB3-222	ENST00000607805	PKD1L1	Q8TDX9	2849 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	TMEM129	A0AVI4	362 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	WDR91	A4D1P6	747 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	TMEM229A	B2RXF0	380 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	RPL36A-HNRNPH2	H7BZ11	118 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	FZD7	O75084	574 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	ZNF432	O94892	652 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	SNUPN	O95149	360 aa	Known RBP	18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	NR2F1	P10589	423 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	ANXA11	P50995	505 aa	Known RBP	18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	TUBA1B	P68363	451 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	TUBA4A	P68366	448 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	IFFO1	Q0D2I5	559 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	CARTPT	Q16568	116 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	IQCC	Q4KMZ1	466 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	C1orf140	Q5VVS0	124 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	TUBA1A	Q71U36	451 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	VRK2	Q86Y07	508 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	PEX5L	Q8IYB4	626 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	OR4F15	Q8NGB8	312 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	DOK1	Q99704	481 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	KCNS3	Q9BQ31	491 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	ZNF442	Q9H7R0	627 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	SLC6A13	Q9NSD5	602 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	AIG1	Q9NVV5	245 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	ADPRHL2	Q9NX46	363 aa		18.22	■□□□□ 0.51
NECAB3-222	ENST00000607805	LRP5L	A4QPB2	252 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	GSN	P06396	782 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	TFPT	P0C1Z6	253 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	PRG2	P13727	222 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	IL2RG	P31785	369 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	SLC1A6	P48664	564 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	UBE2N	P61088	152 aa	Known RBP	18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	RNF220	Q5VTB9	566 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	ANKK1	Q8NFD2	765 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	OR52P1P	Q8NH57	321 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	PNPT1	Q8TCS8	783 aa	Known RBP	18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	C1orf159	Q96HA4	380 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	TAPBPL	Q9BX59	468 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	RAB1B	Q9H0U4	201 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	MOV10	Q9HCE1	1003 aa	Known RBP	18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	FBXO9	Q9UK97	447 aa	Predicted RBP	18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805	RASD1	Q9Y272	281 aa		18.21	■□□□□ 0.51
NECAB3-222	ENST00000607805		A0A096LPE4	126 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805		A0A1W2PPZ6	126 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	HAX1	O00165	279 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	KRT33A	O76009	404 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	CELA3B	P08861	270 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	SH3BGR	P55822	239 aa	Predicted RBP	18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	NME5	P56597	212 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	VSNL1	P62760	191 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	EGR4	Q05215	589 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	LRRC74A	Q0VAA2	488 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	RIN1	Q13671	783 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	PRAMEF8	Q5VWM4	474 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	PRAMEF7	Q5VXH5	474 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	LIPN	Q5VXI9	398 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	NIPAL3	Q6P499	406 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZNF621	Q6ZSS3	439 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	CLIP4	Q8N3C7	705 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	RFLNB	Q8N5W9	214 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	STK35	Q8TDR2	534 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	AEN	Q8WTP8	325 aa	Known RBP	18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	HPS1	Q92902	700 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	OR52E6	Q96RD3	313 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	PTDSS2	Q9BVG9	487 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805	GPR45	Q9Y5Y3	372 aa		18.2	■□□□□ 0.5
NECAB3-222	ENST00000607805		A0A096LPI6	279 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZNF503-AS2	A6NEH8	195 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms