RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 ZSWIM7Q19AV6 140 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 TBRG1Q3YBR2 411 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 GTDC1Q4AE62 458 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 BEND6Q5SZJ8 279 aaPredicted RBP21.23■□□□□ 0.99
SNX5-219ENST00000606602 OR1K1Q8NGR3 316 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 TMEM19Q96HH6 336 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 BOD1Q96IK1 185 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 ITCHQ96J02 903 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 KCNS3Q9BQ31 491 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 ARMC7Q9H6L4 198 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 RMND5AQ9H871 391 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 CUBNO60494 3623 aa21.23■□□□□ 0.99
SNX5-219ENST00000606602 IGHV1-18A0A0C4DH31 117 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 A0A0G2JPF8 293 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 TMEM120BA0PK00 339 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 TMEM247A6NEH6 219 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 HNRNPCL2B2RXH8 293 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 HNRNPCL3B7ZW38 293 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 HNRNPCL1O60812 293 aaKnown RBP21.22■□□□□ 0.99
SNX5-219ENST00000606602 FAM157CP0CG43 387 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 HNRNPCL4P0DMR1 293 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 USF1P22415 310 aaPredicted RBP21.22■□□□□ 0.99
SNX5-219ENST00000606602 SWI5Q1ZZU3 235 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 MST1LQ2TV78 715 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 PRAMEF8Q5VWM4 474 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 PRAMEF7Q5VXH5 474 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 ATG16L1Q676U5 607 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 CYB5R2Q6BCY4 276 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 NIPAL3Q6P499 406 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 SERPINA11Q86U17 422 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 SLC38A2Q96QD8 506 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 SPATA9Q9BWV2 254 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 RASD1Q9Y272 281 aa21.22■□□□□ 0.99
SNX5-219ENST00000606602 A0A096LPI6 279 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 AHSA1O95433 338 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 UBE2NP61088 152 aaKnown RBP21.21■□□□□ 0.99
SNX5-219ENST00000606602 SLC9B1Q4ZJI4 515 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 C6orf10Q5SRN2 563 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 EPHX4Q8IUS5 362 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 PHC2Q8IXK0 858 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 TMEM158Q8WZ71 300 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 C3orf49Q96BT1 292 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 MAELQ96JY0 434 aaKnown RBP21.21■□□□□ 0.99
SNX5-219ENST00000606602 ALKBH3Q96Q83 286 aaPredicted RBP21.21■□□□□ 0.99
SNX5-219ENST00000606602 BEX2Q9BXY8 128 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 SDR39U1Q9NRG7 319 aaPredicted RBP21.21■□□□□ 0.99
SNX5-219ENST00000606602 THUMPD1Q9NXG2 353 aaKnown RBP21.21■□□□□ 0.99
SNX5-219ENST00000606602 ZIM2Q9NZV7 527 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 CHST2Q9Y4C5 530 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 FKBP7Q9Y680 259 aa21.21■□□□□ 0.99
SNX5-219ENST00000606602 OR6C65A6NJZ3 312 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 NPIPB7O75200 414 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 CRYAAP02489 173 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 IGHV4-31P0DP07 118 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 SNRPD2P62316 118 aaKnown RBP21.2■□□□□ 0.98
SNX5-219ENST00000606602 MSANTD1Q6ZTZ1 278 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 LINGO2Q7L985 606 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 STK35Q8TDR2 534 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 BCL2L2Q92843 193 aaPredicted RBP21.2■□□□□ 0.98
SNX5-219ENST00000606602 VPS33AQ96AX1 596 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 SLC25A36Q96CQ1 311 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 IFT52Q9Y366 437 aa21.2■□□□□ 0.98
SNX5-219ENST00000606602 TMEM229AB2RXF0 380 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 NR5A2O00482 541 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 UPK3AO75631 287 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 ZNF16P17020 682 aaPredicted RBP21.19■□□□□ 0.98
SNX5-219ENST00000606602 SERPINF1P36955 418 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 PDLIM4P50479 330 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 POLR2JP52435 117 aaKnown RBP21.19■□□□□ 0.98
SNX5-219ENST00000606602 LSM11P83369 360 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNX5-219ENST00000606602 HOXC5Q00444 222 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 ZNF311Q5JNZ3 666 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 KDM8Q8N371 416 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 OR9I1Q8NGQ6 314 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 MFSD8Q8NHS3 518 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 SORCS2Q96PQ0 1159 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 KATNB1Q9BVA0 655 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 CA10Q9NS85 328 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 TMEM160Q9NX00 188 aa21.19■□□□□ 0.98
SNX5-219ENST00000606602 A0A096LPE4 126 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 A0A1W2PPZ6 126 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 UBDO15205 165 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 PHF1O43189 567 aaPredicted RBP21.18■□□□□ 0.98
SNX5-219ENST00000606602 PNMTP11086 282 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 PAX7P23759 505 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 TUBA1BP68363 451 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 TUBA4AP68366 448 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 GGTLC2Q14390 218 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 ANKRD16Q6P6B7 361 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 TUBA1AQ71U36 451 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 SLC46A3Q7Z3Q1 461 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 MAVSQ7Z434 540 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 OR52B2Q96RD2 323 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 VRK1Q99986 396 aaPredicted RBP21.18■□□□□ 0.98
SNX5-219ENST00000606602 LPAR3Q9UBY5 353 aa21.18■□□□□ 0.98
SNX5-219ENST00000606602 ARPC4-TTLL3A0A0A6YYG9 625 aa21.17■□□□□ 0.98
SNX5-219ENST00000606602 FTCDNL1E5RQL4 147 aa21.17■□□□□ 0.98
SNX5-219ENST00000606602 NUDT7P0C024 238 aa21.17■□□□□ 0.98
SNX5-219ENST00000606602 GTF2E2P29084 291 aaKnown RBP21.17■□□□□ 0.98
SNX5-219ENST00000606602 RPS5P46782 204 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms