RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 FOXD3Q9UJU5 478 aaPredicted RBP12.36□□□□□ -0.43
RNF40-212ENST00000602784 RASD1Q9Y272 281 aa12.36□□□□□ -0.43
RNF40-212ENST00000602784 A0A1W2PRQ8 180 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 AQP12BA6NM10 295 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 A8MXE2 369 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 J3KTA2 159 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 AKR7A3O95154 331 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 MT-ND1P03886 318 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 GTF2E2P29084 291 aaKnown RBP12.35□□□□□ -0.43
RNF40-212ENST00000602784 YAP1P46937 504 aaKnown RBP12.35□□□□□ -0.43
RNF40-212ENST00000602784 P2RY4P51582 365 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 DGCR6Q14129 220 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 SLC17A1Q14916 467 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 TMEM225Q6GV28 225 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 H1FNTQ75WM6 255 aaPredicted RBP12.35□□□□□ -0.43
RNF40-212ENST00000602784 NKAIN4Q8IVV8 208 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 TUSC5Q8IXB3 177 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 AQP12AQ8IXF9 295 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 RNF113BQ8IZP6 322 aaKnown RBP12.35□□□□□ -0.43
RNF40-212ENST00000602784 TMEM255BQ8WV15 326 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 TMEM239Q8WW34 195 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 SLC25A36Q96CQ1 311 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 DHRS1Q96LJ7 313 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 ZNF347Q96SE7 839 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 PIP5K1AQ99755 562 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 MRPL39Q9NYK5 338 aaKnown RBP12.35□□□□□ -0.43
RNF40-212ENST00000602784 CLEC4AQ9UMR7 237 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 POMPQ9Y244 141 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 MED31Q9Y3C7 131 aa12.35□□□□□ -0.43
RNF40-212ENST00000602784 NKX2-6A6NCS4 301 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 RAMP1O60894 148 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 FABP3P05413 133 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 H1F0P07305 194 aaKnown RBP12.34□□□□□ -0.43
RNF40-212ENST00000602784 UMPSP11172 480 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 GRPRP30550 384 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 MAGEA2P43356 314 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 SMIM11AP58511 58 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 SIRPAP78324 504 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 LTBQ06643 244 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 POU4F3Q15319 338 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 ZNF74Q16587 644 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 ASRGL1Q7L266 308 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 GALNT5Q7Z7M9 940 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 ACBD4Q8NC06 268 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 LIPHQ8WWY8 451 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
RNF40-212ENST00000602784 MOGAT1Q96PD6 335 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 ASPNQ9BXN1 380 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 FKRPQ9H9S5 495 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 MEPEQ9NQ76 525 aaPredicted RBP12.34□□□□□ -0.43
RNF40-212ENST00000602784 PARPBPQ9NWS1 579 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
RNF40-212ENST00000602784 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 ZNF229Q9UJW7 825 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 V9GYQ6 96 aa12.34□□□□□ -0.43
RNF40-212ENST00000602784 HECTD1Q9ULT8 2610 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 A1L4Q6 167 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 PRSS44E7EML9 344 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 M0R082 166 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 EEF1E1O43324 174 aaKnown RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
RNF40-212ENST00000602784 CNOT4O95628 575 aaKnown RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 PEX19P40855 299 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 UGT2B15P54855 530 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 CHRNB3Q05901 458 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 FLOT2Q14254 428 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 STK32CQ86UX6 486 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 LSRQ86X29 649 aaPredicted RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 ZDHHC21Q8IVQ6 265 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 C10orf53Q8N6V4 93 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 OR9K2Q8NGE7 335 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 ZNF417Q8TAU3 575 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 SLC7A13Q8TCU3 470 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 RNASE6Q93091 150 aaKnown RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 OXGR1Q96P68 337 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 ZNF587Q96SQ5 575 aaPredicted RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 FANCFQ9NPI8 374 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 NANSQ9NR45 359 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 ELOVL5Q9NYP7 299 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 C6orf203Q9P0P8 240 aaPredicted RBP12.33□□□□□ -0.44
RNF40-212ENST00000602784 RHCGQ9UBD6 479 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 FLVCR1Q9Y5Y0 555 aa12.33□□□□□ -0.44
RNF40-212ENST00000602784 PLPP3O14495 311 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 KRT36O76013 467 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 CH25HO95992 272 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 HIST1H2ABP04908 130 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 RAP2AP10114 183 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 IGFBP2P18065 325 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 FUT4P22083 530 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 OR3A2P47893 321 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 HMGA2P52926 109 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms