RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 ZNF229Q9UJW7 825 aa20.54■□□□□ 0.88
IRF3-227ENST00000600911 ZGRF1Q86YA3 2104 aa20.54■□□□□ 0.88
IRF3-227ENST00000600911 IGSF10Q6WRI0 2623 aa20.54■□□□□ 0.88
IRF3-227ENST00000600911 E9PQ18 207 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 LINC01387J3KSC0 135 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 ENPP1P22413 925 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 UQCRC1P31930 480 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 EIF1AXP47813 144 aaKnown RBP20.53■□□□□ 0.88
IRF3-227ENST00000600911 CLK1P49759 484 aaKnown RBP20.53■□□□□ 0.88
IRF3-227ENST00000600911 HBMQ6B0K9 141 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 ESPNLQ6ZVH7 1005 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 CCDC103Q8IW40 242 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 WDFY1Q8IWB7 410 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 CDK20Q8IZL9 346 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 IQCF1Q8N6M8 205 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 LRRC75AQ8NAA5 344 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 OR6S1Q8NH40 331 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 OSTF1Q92882 214 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 SAMD8Q96LT4 415 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 SLX1AQ9BQ83 275 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 OR52D1Q9H346 318 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 SMPD3Q9NY59 655 aaPredicted RBP20.53■□□□□ 0.88
IRF3-227ENST00000600911 MS4A18H0YCH9 400 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 OR2T1O43869 369 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 OSMP13725 252 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 MLLT10P55197 1068 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 RPL18Q07020 188 aaKnown RBP20.53■□□□□ 0.88
IRF3-227ENST00000600911 MS4A18Q3C1V0 323 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 ZBED5Q49AG3 693 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 PARP8Q8N3A8 854 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 OR5J2Q8NH18 312 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 GABARAPL3Q9BY60 117 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 ZNF556Q9HAH1 456 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 KRCC1Q9NPI7 259 aaPredicted RBP20.53■□□□□ 0.88
IRF3-227ENST00000600911 ALKBH4Q9NXW9 302 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 TRAPPC4Q9Y296 219 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 HIF3AQ9Y2N7 669 aa20.53■□□□□ 0.88
IRF3-227ENST00000600911 ALPK2Q86TB3 2170 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 MCIDASD6RGH6 385 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 BLOC1S5-TXNDC5H3BN57 136 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 SMAD9O15198 467 aaKnown RBP20.52■□□□□ 0.88
IRF3-227ENST00000600911 MT-ATP6P00846 226 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 HLA-DOBP13765 273 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 H3F3AP84243 136 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 NFATC3Q12968 1075 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 CLEC12AQ5QGZ9 265 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 MAMDC2Q7Z304 686 aaPredicted RBP20.52■□□□□ 0.88
IRF3-227ENST00000600911 OR5M9Q8NGP3 310 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 OR4Q3Q8NH05 313 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 FANK1Q8TC84 345 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 ROBO4Q8WZ75 1007 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 BBC3Q96PG8 261 aaPredicted RBP20.52■□□□□ 0.88
IRF3-227ENST00000600911 TUBA1CQ9BQE3 449 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 TAPBPLQ9BX59 468 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 RASSF4Q9H2L5 321 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 IL20Q9NYY1 176 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 CAMK2AQ9UQM7 478 aa20.52■□□□□ 0.88
IRF3-227ENST00000600911 C11orf98E9PRG8 122 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 PLPP3O14495 311 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 CLIC3O95833 236 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 F13BP05160 661 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 CPN1P15169 458 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 FKBP2P26885 142 aaKnown RBP20.51■□□□□ 0.87
IRF3-227ENST00000600911 POU1F1P28069 291 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 COX10Q12887 443 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 NPRL3Q12980 569 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 BCL2A1Q16548 175 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 EMC4Q5J8M3 183 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 NANOGNBQ7Z5D8 188 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 PRDM14Q9GZV8 571 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 PNPLA3Q9NST1 481 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 MRPL39Q9NYK5 338 aaKnown RBP20.51■□□□□ 0.87
IRF3-227ENST00000600911 KLHL13Q9P2N7 655 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 B3GAT1Q9P2W7 334 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 CDH10Q9Y6N8 788 aa20.51■□□□□ 0.87
IRF3-227ENST00000600911 SPTA1P02549 2419 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 GJE1A6NN92 205 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 M0R129 80 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 SFTPCP11686 197 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 GSTM3P21266 225 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 SLC9A3P48764 834 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 CRISP1P54107 249 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 CARD18P57730 90 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 DBPQ10586 325 aaPredicted RBP20.5■□□□□ 0.87
IRF3-227ENST00000600911 SGCBQ16585 318 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 C6orf52Q5T4I8 152 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 ACSM5Q6NUN0 579 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 CCDC71Q8IV32 467 aaPredicted RBP20.5■□□□□ 0.87
IRF3-227ENST00000600911 WBP1Q96G27 269 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 GRIP2Q9C0E4 1043 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 CHST11Q9NPF2 352 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 MED12LQ86YW9 2145 aa20.5■□□□□ 0.87
IRF3-227ENST00000600911 H3BN98 237 aa20.49■□□□□ 0.87
IRF3-227ENST00000600911 RAC3P60763 192 aa20.49■□□□□ 0.87
IRF3-227ENST00000600911 PMS2P3Q13401 168 aa20.49■□□□□ 0.87
IRF3-227ENST00000600911 PTGES3Q15185 160 aaKnown RBP20.49■□□□□ 0.87
IRF3-227ENST00000600911 ZNF239Q16600 458 aaKnown RBP20.49■□□□□ 0.87
IRF3-227ENST00000600911 ARHGAP11AQ6P4F7 1023 aa20.49■□□□□ 0.87
IRF3-227ENST00000600911 SMARCD3Q6STE5 483 aa20.49■□□□□ 0.87
IRF3-227ENST00000600911 GHDCQ8N2G8 530 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms