RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 POU2F3Q9UKI9 436 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 NSD1Q96L73 2696 aaPredicted RBP13.86□□□□□ -0.19
VRK3-221ENST00000600284 TRBV5-3A0A0A0MS03 114 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 A0A1W2PR80 420 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 ELOA3DA6NLF2 546 aaPredicted RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 EVPLLA8MZ36 301 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 FTCDNL1E5RQL4 147 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 E7EQL1 145 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 NR5A2O00482 541 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 FZD7O75084 574 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 IGHV4-39P01824 125 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 CDK6Q00534 326 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 EGR4Q05215 589 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 VEZF1Q14119 521 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 SQLEQ14534 574 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 ELOA3BQ3SY89 546 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 C9orf135Q5VTT2 229 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 DNM1P46Q6ZS02 220 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 NET1Q7Z628 596 aaPredicted RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 FBXL14Q8N1E6 418 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 BHLHE22Q8NFJ8 381 aaPredicted RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 ELOA3Q8NG57 546 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 NFKBIDQ8NI38 313 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 DNAJA4Q8WW22 397 aaPredicted RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 ADAD1Q96M93 576 aaKnown RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 HS6ST2Q96MM7 605 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 ZNF317Q96PQ6 595 aaPredicted RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 INTS9Q9NV88 658 aaKnown RBP13.85□□□□□ -0.19
VRK3-221ENST00000600284 VAPAQ9P0L0 249 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 B3GALT5Q9Y2C3 310 aa13.85□□□□□ -0.19
VRK3-221ENST00000600284 PRORSD1PA6NEY8 169 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 HMGB1P1B2RPK0 211 aaPredicted RBP13.84□□□□□ -0.19
VRK3-221ENST00000600284 KRT33AO76009 404 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 PNMTP11086 282 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 SLC6A2P23975 617 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 ACVR1BP36896 505 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 PPP2R2BQ00005 443 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 HOXC5Q00444 222 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 AGKQ53H12 422 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 FAM91A1Q658Y4 838 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 C11orf71Q6IPW1 123 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 KLHL24Q6TFL4 600 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 EPHX4Q8IUS5 362 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 MUC15Q8N387 334 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 SLC25A36Q96CQ1 311 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 ZNF607Q96SK3 696 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 PTDSS2Q9BVG9 487 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 C1QTNF6Q9BXI9 259 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 REG4Q9BYZ8 158 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 LINC00470Q9BZP3 86 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 VIPAS39Q9H9C1 493 aa13.84□□□□□ -0.19
VRK3-221ENST00000600284 MOV10Q9HCE1 1003 aaKnown RBP13.84□□□□□ -0.19
VRK3-221ENST00000600284 HIVEP2P31629 2446 aa13.83□□□□□ -0.19
VRK3-221ENST00000600284 ABCA2Q9BZC7 2435 aa13.83□□□□□ -0.19
VRK3-221ENST00000600284 RNF223E7ERA6 249 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 ZNF587BE7ETH6 402 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 SERPINB7O75635 380 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 BMP4P12644 408 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 HOXB1P14653 301 aaPredicted RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 GTF2E2P29084 291 aaKnown RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 RPS5P46782 204 aaKnown RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 SELENOPP49908 381 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 FABP6P51161 128 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 SLC25A3Q00325 362 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 SPOCK1Q08629 439 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 SCARB2Q14108 478 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 FAM69AQ5T7M9 428 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 NIPAL3Q6P499 406 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 ULK3Q6PHR2 472 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 HDXQ7Z353 690 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 OR6S1Q8NH40 331 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 MAGEE2Q8TD90 523 aaPredicted RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 CKAP2Q8WWK9 683 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 SLC38A4Q969I6 547 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 KTI12Q96EK9 354 aaPredicted RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 MAGEB18Q96M61 343 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 OXGR1Q96P68 337 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 RSPO3Q9BXY4 272 aaPredicted RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 TESQ9UGI8 421 aaKnown RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 LEF1Q9UJU2 399 aaPredicted RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 RCE1Q9Y256 329 aa13.83□□□□□ -0.2
VRK3-221ENST00000600284 FN1P02751 2386 aaKnown RBP13.83□□□□□ -0.2
VRK3-221ENST00000600284 CSPG4Q6UVK1 2322 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 LOC102725191A0A1B0GVB3 256 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 A0A1B0GWA3 101 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 RPL36A-HNRNPH2H7BZ11 118 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 AIM2O14862 343 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 NDUFS7O75251 213 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 ZNF43P17038 809 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 APOBEC3AP31941 199 aaPredicted RBP13.82□□□□□ -0.2
VRK3-221ENST00000600284 SH3BGRP55822 239 aaPredicted RBP13.82□□□□□ -0.2
VRK3-221ENST00000600284 DSCR9P59020 149 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 MFSD13AQ14CX5 517 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 ADRM1Q16186 407 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 C3orf36Q3SXR2 165 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 RUNDC3AQ59EK9 446 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 ALG10BQ5I7T1 473 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 DLEU7Q6UYE1 221 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 LSRQ86X29 649 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms