RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
XRCC1-209ENST00000599693 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
XRCC1-209ENST00000599693 ASIC5Q9NY37 505 aa12.92□□□□□ -0.34
XRCC1-209ENST00000599693 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
XRCC1-209ENST00000599693 IGHV2OR16-5A0A0B4J2B6 119 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 SH3PXD2BA1X283 911 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 TMEM89A2RUT3 159 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 CFAP73A6NFT4 308 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 AGAP5A6NIR3 686 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 FAM157AC9JC47 383 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 LYNX1G3V0Z9 82 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 SCN2BO60939 215 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 UPK3AO75631 287 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 VAMP5O95183 116 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 CPSF4O95639 269 aaKnown RBP12.91□□□□□ -0.34
XRCC1-209ENST00000599693 ADRA2AP08913 450 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 LYNX1P0DP58 116 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 CBR1P16152 277 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 CXCR1P25024 350 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 IL1RL1Q01638 556 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 EMX2Q04743 252 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 NIPAL3Q6P499 406 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 SHQ1Q6PI26 577 aaKnown RBP12.91□□□□□ -0.34
XRCC1-209ENST00000599693 ANKRD46Q86W74 232 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 FAM216AQ8WUB2 273 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 GCDHQ92947 438 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-209ENST00000599693 TMEM186Q96B77 213 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 APOPT1Q96IL0 206 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 TRNT1Q96Q11 434 aaKnown RBP12.91□□□□□ -0.34
XRCC1-209ENST00000599693 TAPBPLQ9BX59 468 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 SLC38A1Q9H2H9 487 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 HIF1ANQ9NWT6 349 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 ADPRHL2Q9NX46 363 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-209ENST00000599693 ZDHHC2Q9UIJ5 367 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 GRIP1Q9Y3R0 1128 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 SPEF1Q9Y4P9 236 aa12.91□□□□□ -0.34
XRCC1-209ENST00000599693 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 HMGN4O00479 90 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 FRS3O43559 492 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 MSMBP08118 114 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 RPS4Y1P22090 263 aaKnown RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 ARRB2P32121 409 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 CHI3L1P36222 383 aaPredicted RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 SERPINB5P36952 375 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 ROR2Q01974 943 aaKnown RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 POU3F1Q03052 451 aaPredicted RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 SNTB2Q13425 540 aaKnown RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 GNA13Q14344 377 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 SYPL1Q16563 259 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 GSTA3Q16772 222 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 EPHX4Q8IUS5 362 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 ANKFN1Q8N957 763 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 CLDND2Q8NHS1 167 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 EPS8L3Q8TE67 593 aaKnown RBP12.9□□□□□ -0.34
XRCC1-209ENST00000599693 RASD1Q9Y272 281 aa12.9□□□□□ -0.34
XRCC1-209ENST00000599693 TRIM77I1YAP6 450 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 RGS9O75916 674 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-209ENST00000599693 TFP02787 698 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 CHRM4P08173 479 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 ARR3P36575 388 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 GPR6P46095 362 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-209ENST00000599693 HILS1P60008 231 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 NPRL3Q12980 569 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 DAG1Q14118 895 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 SMU1Q2TAY7 513 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 ANXA8L1Q5VT79 327 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 PRAMEF8Q5VWM4 474 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 PRAMEF7Q5VXH5 474 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 LRRC74BQ6ZQY2 392 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 USP43Q70EL4 1123 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 PEG10Q86TG7 708 aaKnown RBP12.89□□□□□ -0.35
XRCC1-209ENST00000599693 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
XRCC1-209ENST00000599693 ZNF440Q8IYI8 595 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 VPS37AQ8NEZ2 397 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 ANKK1Q8NFD2 765 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 SLC35A5Q9BS91 424 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 RBM4Q9BWF3 364 aaKnown RBP12.89□□□□□ -0.35
XRCC1-209ENST00000599693 DPY30Q9C005 99 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 LPAR2Q9HBW0 351 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 PCDHB10Q9UN67 800 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 CMAHPQ9Y471 501 aa12.89□□□□□ -0.35
XRCC1-209ENST00000599693 ZNF503-AS2A6NEH8 195 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 A8MVM7 634 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 TMEM229AB2RXF0 380 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 RPL36A-HNRNPH2H7BZ11 118 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 M0R233 179 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 SYNGR3O43761 229 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 C1QCP02747 245 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 SAGP10523 405 aaPredicted RBP12.88□□□□□ -0.35
XRCC1-209ENST00000599693 IL7RP16871 459 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 ARFIP2P53365 341 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 ARF1P84077 181 aaKnown RBP12.88□□□□□ -0.35
XRCC1-209ENST00000599693 BNIP2Q12982 314 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 CASP8Q14790 479 aa12.88□□□□□ -0.35
XRCC1-209ENST00000599693 SLC9B1Q4ZJI4 515 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms