RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TMEM43Q9BTV4 400 aa14.79□□□□□ -0.04
SSBP4-204ENST00000597724 FAM53CQ9NYF3 392 aa14.79□□□□□ -0.04
SSBP4-204ENST00000597724 C6orf203Q9P0P8 240 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-204ENST00000597724 RASD1Q9Y272 281 aa14.79□□□□□ -0.04
SSBP4-204ENST00000597724 SH3GLB1Q9Y371 365 aa14.79□□□□□ -0.04
SSBP4-204ENST00000597724 MAP1AP78559 2803 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-204ENST00000597724 TRAPPC13A5PLN9 417 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 NDUFAB1O14561 156 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 CHP2O43745 196 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 IGHV3-9P01782 118 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 TNFRSF1BP20333 461 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 COX5AP20674 150 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 GSK3BP49841 420 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 PSME3P61289 254 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 POU4F3Q15319 338 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 LRRC23Q53EV4 343 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-204ENST00000597724 GPAT4Q86UL3 456 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 UBE2J2Q8N2K1 259 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 ANKS4BQ8N8V4 417 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 KISS1RQ969F8 398 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-204ENST00000597724 ZNF385AQ96PM9 386 aaKnown RBP14.78□□□□□ -0.04
SSBP4-204ENST00000597724 EPYCQ99645 322 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 USB1Q9BQ65 265 aaKnown RBP14.78□□□□□ -0.04
SSBP4-204ENST00000597724 LIME1Q9H400 295 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 ALG2Q9H553 416 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 ABCD2Q9UBJ2 740 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 SEC14L4Q9UDX3 406 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 MALT1Q9UDY8 824 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 PRR14LQ5THK1 2151 aa14.78□□□□□ -0.04
SSBP4-204ENST00000597724 A0A1W2PPR1 153 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 CXCR6O00574 342 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 KLF4O43474 513 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 DCTN3O75935 186 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 LYZL6O75951 148 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 IGHV1-2P23083 117 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 IL32P24001 234 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 GTF2E2P29084 291 aaKnown RBP14.77□□□□□ -0.05
SSBP4-204ENST00000597724 GRPRP30550 384 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 SELENOWP63302 87 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 LTBQ06643 244 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 CASP12Q6UXS9 341 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 CREB3L2Q70SY1 520 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 BHLHA15Q7RTS1 189 aaPredicted RBP14.77□□□□□ -0.05
SSBP4-204ENST00000597724 ZNF433Q8N7K0 673 aaPredicted RBP14.77□□□□□ -0.05
SSBP4-204ENST00000597724 HSD17B8Q92506 261 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 PLEKHF2Q9H8W4 249 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 ASB6Q9NWX5 421 aa14.77□□□□□ -0.05
SSBP4-204ENST00000597724 M0R082 166 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 BGLAPP02818 100 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 CBLP22681 906 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 LOXP28300 417 aaPredicted RBP14.76□□□□□ -0.05
SSBP4-204ENST00000597724 DNAJA1P31689 397 aaKnown RBP14.76□□□□□ -0.05
SSBP4-204ENST00000597724 OR1E2P47887 323 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 FAPQ12884 760 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 MFSD13AQ14CX5 517 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 TAB1Q15750 504 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 TSPO2Q5TGU0 170 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 WDR88Q6ZMY6 472 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 H1FNTQ75WM6 255 aaPredicted RBP14.76□□□□□ -0.05
SSBP4-204ENST00000597724 AAED1Q7RTV5 226 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 EPHX4Q8IUS5 362 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 KDM8Q8N371 416 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 ZNF417Q8TAU3 575 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 PIK3IP1Q96FE7 263 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 SLC41A3Q96GZ6 507 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 MPP4Q96JB8 637 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 ZNF587Q96SQ5 575 aaPredicted RBP14.76□□□□□ -0.05
SSBP4-204ENST00000597724 ZNF426Q9BUY5 554 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 SPAG4Q9NPE6 437 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 SLC7A10Q9NS82 523 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 SLC7A7Q9UM01 511 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 B3GALT5Q9Y2C3 310 aa14.76□□□□□ -0.05
SSBP4-204ENST00000597724 CELSR1Q9NYQ6 3014 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 LOC102725191A0A1B0GVB3 256 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 PDLIM1O00151 329 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 GSTA4O15217 222 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 SHOX2O60902 331 aaPredicted RBP14.75□□□□□ -0.05
SSBP4-204ENST00000597724 PTNP21246 168 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 FOXG1P55316 489 aaPredicted RBP14.75□□□□□ -0.05
SSBP4-204ENST00000597724 BEX5Q5H9J7 111 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 TTC33Q6PID6 262 aaPredicted RBP14.75□□□□□ -0.05
SSBP4-204ENST00000597724 DEF8Q6ZN54 512 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 WFDC8Q8IUA0 241 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 ADPRHL1Q8NDY3 354 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 LZICQ8WZA0 190 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 TPD52L3Q96J77 140 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 OXGR1Q96P68 337 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 MOGAT1Q96PD6 335 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 KCTD14Q9BQ13 255 aaPredicted RBP14.75□□□□□ -0.05
SSBP4-204ENST00000597724 PRSS27Q9BQR3 290 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 POLR2J2Q9GZM3 115 aaKnown RBP14.75□□□□□ -0.05
SSBP4-204ENST00000597724 POLR2J3Q9H1A7 115 aaKnown RBP14.75□□□□□ -0.05
SSBP4-204ENST00000597724 ARL8BQ9NVJ2 186 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 B3GAT1Q9P2W7 334 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 UPB1Q9UBR1 384 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 TAGLN3Q9UI15 199 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 ST6GALNAC2Q9UJ37 374 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 CORINQ9Y5Q5 1042 aa14.75□□□□□ -0.05
SSBP4-204ENST00000597724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.74□□□□□ -0.05
SSBP4-204ENST00000597724 LRRN3E7EW58 273 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms