RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 LMO4P61968 165 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 HBA1P69905 142 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 KCNJ10P78508 379 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 NPRL3Q12980 569 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 CEACAM7Q14002 265 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 PTGR1Q14914 329 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 OR7A5Q15622 319 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ATP6AP1LQ52LC2 224 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 KANK2Q63ZY3 851 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 TMEM225Q6GV28 225 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 TYW3Q6IPR3 259 aaKnown RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 KRT80Q6KB66 452 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ACSM5Q6NUN0 579 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 RBMS3Q6XE24 437 aaKnown RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 LINGO2Q7L985 606 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 OLIG3Q7RTU3 272 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF572Q7Z3I7 529 aaPredicted RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 C6orf120Q7Z4R8 191 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 CMIPQ8IY22 773 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 RIBC1Q8N443 379 aaPredicted RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ANKK1Q8NFD2 765 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 COQ8BQ96D53 544 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 TMPRSS13Q9BYE2 586 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 MRPL37Q9BZE1 423 aaKnown RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 LINC00470Q9BZP3 86 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF665Q9H7R5 613 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ZMAT3Q9HA38 289 aaKnown RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 CRLF2Q9HC73 371 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.71□□□□□ -1.02
TRIM28-210ENST00000597618 OXSMQ9NWU1 459 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF281Q9Y2X9 895 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 CORINQ9Y5Q5 1042 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 DNAJC15Q9Y5T4 150 aa8.71□□□□□ -1.02
TRIM28-210ENST00000597618 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 FAAHO00519 579 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 AP3D1O14617 1153 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 UPK3AO75631 287 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 PRSS23O95084 383 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 MPZL1O95297 269 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 PROCP04070 461 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 ABHD2P08910 425 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 ADRA2CP18825 462 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 PRPS1L1P21108 318 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 NR4A1P22736 598 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 COL8A2P25067 703 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 RPS23P62266 143 aaKnown RBP8.7□□□□□ -1.02
TRIM28-210ENST00000597618 HPCAP84074 193 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 ROR2Q01974 943 aaKnown RBP8.7□□□□□ -1.02
TRIM28-210ENST00000597618 PLAURQ03405 335 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 CCDC153Q494R4 210 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 DCAF12L2Q5VW00 463 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 NIPAL3Q6P499 406 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 CREB3L2Q70SY1 520 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 DDIASQ8IXT1 998 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 CCDC36Q8IYA8 594 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 MIPOL1Q8TD10 442 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 YIPF5Q969M3 257 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 RAB39BQ96DA2 213 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 PPP3R2Q96LZ3 170 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 DUSP26Q9BV47 211 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 TAPBPLQ9BX59 468 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 OR51I1Q9H343 314 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF385DQ9H6B1 395 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 UNKLQ9H9P5 680 aaKnown RBP8.7□□□□□ -1.02
TRIM28-210ENST00000597618 ADPRHL2Q9NX46 363 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 MED29Q9NX70 200 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 PPIAL4AQ9Y536 164 aa8.7□□□□□ -1.02
TRIM28-210ENST00000597618 CLDN24A6NM45 220 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 POM121CA8CG34 1229 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 RPL36A-HNRNPH2H7BZ11 118 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 PLPP2O43688 288 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 SCN2BO60939 215 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 RP2O75695 350 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 TCN1P20061 433 aaPredicted RBP8.69□□□□□ -1.02
TRIM28-210ENST00000597618 GATA3P23771 443 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 CXCR1P25024 350 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 ALDH3B1P43353 468 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 CAPZA2P47755 286 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 P2RY4P51582 365 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 IL13RA1P78552 427 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 ARF1P84077 181 aaKnown RBP8.69□□□□□ -1.02
TRIM28-210ENST00000597618 ZP4Q12836 540 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 OCLNQ16625 522 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 PRAMEF8Q5VWM4 474 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 PRAMEF7Q5VXH5 474 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 FRRS1Q6ZNA5 592 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 MDP1Q86V88 176 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 EPHX4Q8IUS5 362 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 GSPT2Q8IYD1 628 aaKnown RBP8.69□□□□□ -1.02
TRIM28-210ENST00000597618 KRTCAP2Q8N6L1 136 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 TWIST2Q8WVJ9 160 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 CNOT9Q92600 299 aaKnown RBP8.69□□□□□ -1.02
TRIM28-210ENST00000597618 ROPN1LQ96C74 230 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 SYT3Q9BQG1 590 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 ARMCX1Q9P291 453 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 PSMC3IPQ9P2W1 217 aaPredicted RBP8.69□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF346Q9UL40 294 aaKnown RBP8.69□□□□□ -1.02
TRIM28-210ENST00000597618 RCE1Q9Y256 329 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 RASD1Q9Y272 281 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms