RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GNAO1P09471 354 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF17P17021 662 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 IL11P20809 199 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC6A6P31641 620 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 IDUAP35475 653 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 CDC42P60953 191 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 PPIAP62937 165 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 MFSD13AQ14CX5 517 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 TMEM44Q2T9K0 475 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 TMEM176BQ3YBM2 270 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 ANKDD1AQ495B1 522 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 FAM69AQ5T7M9 428 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SLX4IPQ5VYV7 408 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC27A4Q6P1M0 643 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 C3orf33Q6P1S2 294 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF620Q6ZNG0 422 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC46A3Q7Z3Q1 461 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 LRRC17Q8N6Y2 441 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 FAM83FQ8NEG4 500 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 MFSD8Q8NHS3 518 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 FANK1Q8TC84 345 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 RELTQ969Z4 430 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 NR1H4Q96RI1 486 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 ASPNQ9BXN1 380 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 TTTY12Q9BZ98 90 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 OR11A1Q9GZK7 315 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 OR52D1Q9H346 318 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 FKRPQ9H9S5 495 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC25A19Q9HC21 320 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 IMPAD1Q9NX62 359 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 TVP23BQ9NYZ1 205 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF229Q9UJW7 825 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 SIGLEC7Q9Y286 467 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 PCDHGB7Q9Y5F8 929 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 CELSR1Q9NYQ6 3014 aa11.77□□□□□ -0.53
SHKBP1-209ENST00000595803 ADGRG4Q8IZF6 3080 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 GJE1A6NN92 205 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 FAM166BA8MTA8 275 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 E9PQ18 207 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 H3BML4 177 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 BLOC1S5-TXNDC5H3BN57 136 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 LINC01387J3KSC0 135 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 ACOT7O00154 380 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 NDUFB2O95178 105 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 OPN1LWP04000 364 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 HPNP05981 417 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 RPSAP08865 295 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 RNF224P0DH78 156 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 PEPDP12955 493 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 ELK4P28324 431 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 RPL4P36578 427 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 RFC3P40938 356 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 CD97P48960 835 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 OR2B6P58173 313 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 PRPS1P60891 318 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 RAC1P63000 192 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC10A1Q14973 349 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 HYAL4Q2M3T9 481 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 SYT14P1Q58G82 188 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 CLEC12AQ5QGZ9 265 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 C12orf73Q69YU5 71 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 IGFL3Q6UXB1 125 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC43A2Q8N370 569 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 TMEM251Q8N6I4 163 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 IQCF1Q8N6M8 205 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 OR2T33Q8NG76 320 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 FAM81AQ8TBF8 368 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 SSC4DQ8WTU2 575 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 DNAJA3Q96EY1 480 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 SFXN2Q96NB2 322 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC38A2Q96QD8 506 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 OR5B2Q96R09 309 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 PTDSS2Q9BVG9 487 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 IFT27Q9BW83 186 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 PRRG3Q9BZD7 231 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 PLA2G12AQ9BZM1 189 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 UBQLN3Q9H347 655 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 QPCTLQ9NXS2 382 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 UBAP1Q9NZ09 502 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 HDGFL3Q9Y3E1 203 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 CSAG2Q9Y5P2 127 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 F8P00451 2351 aa11.76□□□□□ -0.53
SHKBP1-209ENST00000595803 MPZL2O60487 215 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 GLSO94925 669 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 ASAH2BP0C7U1 165 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 IMPDH2P12268 514 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 GRPRP30550 384 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 SFTPDP35247 375 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 UQCRFS1P47985 274 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 B3GALT5-AS1P59052 145 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 ISL1P61371 349 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 PMS2P3Q13401 168 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 OR7A5Q15622 319 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 SNAPC1Q16533 368 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms