RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 IFI44LQ53G44 452 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 Q6ZT83 130 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 H1FNTQ75WM6 255 aaPredicted RBP13.32□□□□□ -0.28
UPF1-202ENST00000594243 P3H2Q8IVL5 708 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 GABRG1Q8N1C3 465 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 RNF148Q8N7C7 305 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 OR9K2Q8NGE7 335 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 APH1AQ96BI3 265 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 WFIKKN1Q96NZ8 548 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 USB1Q9BQ65 265 aaKnown RBP13.32□□□□□ -0.28
UPF1-202ENST00000594243 ASPNQ9BXN1 380 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 SLC19A3Q9BZV2 496 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 GORASP2Q9H8Y8 452 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 RIMS3Q9UJD0 308 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 B3GALT5Q9Y2C3 310 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 CORINQ9Y5Q5 1042 aa13.32□□□□□ -0.28
UPF1-202ENST00000594243 LRBAP50851 2863 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 LYPD3O95274 346 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 MT-ATP6P00846 226 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 IFNW1P05000 195 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
UPF1-202ENST00000594243 CBLP22681 906 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 GRPRP30550 384 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 P2RY4P51582 365 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 ITGADQ13349 1161 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 PIN1Q13526 163 aaPredicted RBP13.31□□□□□ -0.28
UPF1-202ENST00000594243 POU4F3Q15319 338 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 SFRP5Q5T4F7 317 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 CREB3L2Q70SY1 520 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 VTCN1Q7Z7D3 282 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 LSRQ86X29 649 aaPredicted RBP13.31□□□□□ -0.28
UPF1-202ENST00000594243 CXorf67Q86X51 503 aaPredicted RBP13.31□□□□□ -0.28
UPF1-202ENST00000594243 UBE2J2Q8N2K1 259 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 STEAP2Q8NFT2 490 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 GEMIN6Q8WXD5 167 aaKnown RBP13.31□□□□□ -0.28
UPF1-202ENST00000594243 TMEM45BQ96B21 275 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 OXGR1Q96P68 337 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 MED18Q9BUE0 208 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 CD300AQ9UGN4 299 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 PRSS50Q9UI38 385 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 MAGEL2Q9UJ55 1249 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 SAMD4AQ9UPU9 718 aaKnown RBP13.31□□□□□ -0.28
UPF1-202ENST00000594243 CACNA1CQ13936 2221 aa13.31□□□□□ -0.28
UPF1-202ENST00000594243 LOC102725191A0A1B0GVB3 256 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 A6NNC1 897 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 M0R082 166 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 CTAG2O75638 210 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 BGLAPP02818 100 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 NQO1P15559 274 aaKnown RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 ZNF43P17038 809 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 NTF4P34130 210 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 RBM34P42696 430 aaKnown RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 ST3GAL3Q11203 375 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 FBXW10Q5XX13 1052 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 ANKRD34AQ69YU3 496 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 CASP12Q6UXS9 341 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 WDR88Q6ZMY6 472 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 AAED1Q7RTV5 226 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 TSPYL5Q86VY4 417 aaPredicted RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 TMEM200AQ86VY9 491 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 ARHGAP24Q8N264 748 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 SCAIQ8N9R8 606 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 FAM156AQ8NDB6 213 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 ADPRHL1Q8NDY3 354 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 ZNF417Q8TAU3 575 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 HSH2DQ96JZ2 352 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 ZNF587Q96SQ5 575 aaPredicted RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 PRSS27Q9BQR3 290 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 ZNF426Q9BUY5 554 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 AMBRA1Q9C0C7 1298 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 DCAF13Q9NV06 445 aaKnown RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 ASB6Q9NWX5 421 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 UPB1Q9UBR1 384 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 TESMINQ9Y4I5 508 aa13.3□□□□□ -0.28
UPF1-202ENST00000594243 INTS1Q8N201 2190 aaKnown RBP13.3□□□□□ -0.28
UPF1-202ENST00000594243 FAM221AA4D161 298 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 T-ENOLP0DO92 83 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 IL32P24001 234 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 CCKARP32238 428 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 IL1RL1Q01638 556 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 LTBQ06643 244 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 PMS2P3Q13401 168 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 C1DQ13901 141 aaKnown RBP13.29□□□□□ -0.28
UPF1-202ENST00000594243 FXNQ16595 210 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.29□□□□□ -0.28
UPF1-202ENST00000594243 NKAIN4Q8IVV8 208 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 KDM8Q8N371 416 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 ZIC4Q8N9L1 334 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 RBM15BQ8NDT2 890 aaKnown RBP13.29□□□□□ -0.28
UPF1-202ENST00000594243 KISS1RQ969F8 398 aaPredicted RBP13.29□□□□□ -0.28
UPF1-202ENST00000594243 MOGAT1Q96PD6 335 aa13.29□□□□□ -0.28
UPF1-202ENST00000594243 ZNF385AQ96PM9 386 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms