RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CA10Q9NS85 328 aa19.75■□□□□ 0.75
SSBP4-203ENST00000593641 ZNF443Q9Y2A4 671 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-203ENST00000593641 A0A096LPI6 279 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 NR4A2P43354 598 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 SELENOPP49908 381 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 LARS2Q15031 903 aaKnown RBP19.74■□□□□ 0.75
SSBP4-203ENST00000593641 ZSWIM7Q19AV6 140 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 RNF220Q5VTB9 566 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 C1orf140Q5VVS0 124 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 NIPAL3Q6P499 406 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 CREB3L2Q70SY1 520 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 C3orf49Q96BT1 292 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 ZNF317Q96PQ6 595 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-203ENST00000593641 ARMC7Q9H6L4 198 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 MOV10Q9HCE1 1003 aaKnown RBP19.74■□□□□ 0.75
SSBP4-203ENST00000593641 RASD1Q9Y272 281 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 GPR45Q9Y5Y3 372 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 DSPPQ9NZW4 1301 aa19.74■□□□□ 0.75
SSBP4-203ENST00000593641 LOC390937A0A1W2PQ73 354 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 TMEM247A6NEH6 219 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 VWC2LB2RUY7 222 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 PDE5AO76074 875 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 ANP32DO95626 131 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 IL6P05231 212 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 BCHEP06276 602 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 APEHP13798 732 aaKnown RBP19.73■□□□□ 0.75
SSBP4-203ENST00000593641 IGFBP5P24593 272 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 THBS2P35442 1172 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 ACAA2P42765 397 aaKnown RBP19.73■□□□□ 0.75
SSBP4-203ENST00000593641 CRATP43155 626 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 P2RY4P51582 365 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 DSTNP60981 165 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 ARIH2OSQ8N7S6 290 aa19.73■□□□□ 0.75
SSBP4-203ENST00000593641 LOC100289279A0A1B0GTE1 492 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 TRPC5OSA6NMA1 111 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 B9A039 149 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 AHSA1O95433 338 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 TFPTP0C1Z6 253 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 ETFAP13804 333 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 HNF1AP20823 631 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 GTF2E2P29084 291 aaKnown RBP19.72■□□□□ 0.75
SSBP4-203ENST00000593641 EPHA3P29320 983 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 LGALS3BPQ08380 585 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 MAPK11Q15759 364 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 IQCCQ4KMZ1 466 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 VHLLQ6RSH7 139 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 ANKS4BQ8N8V4 417 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 WDR55Q9H6Y2 383 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-203ENST00000593641 ZNF232Q9UNY5 417 aa19.72■□□□□ 0.75
SSBP4-203ENST00000593641 ARPC4-TTLL3A0A0A6YYG9 625 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 HDAC3O15379 428 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 SH3BGRP55822 239 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-203ENST00000593641 NAAAQ02083 359 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 KRTAP24-1Q3LI83 254 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 C3orf36Q3SXR2 165 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 HHATQ5VTY9 493 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 NXNQ6DKJ4 435 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 ZNF540Q8NDQ6 660 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 MAGEE2Q8TD90 523 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-203ENST00000593641 STK35Q8TDR2 534 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 SLC38A5Q8WUX1 472 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 MSI2Q96DH6 328 aaKnown RBP19.71■□□□□ 0.75
SSBP4-203ENST00000593641 PRR14Q9BWN1 585 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 LINC00470Q9BZP3 86 aa19.71■□□□□ 0.75
SSBP4-203ENST00000593641 THUMPD1Q9NXG2 353 aaKnown RBP19.71■□□□□ 0.75
SSBP4-203ENST00000593641 FBXO9Q9UK97 447 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-203ENST00000593641 A0A096LPE4 126 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 A0A1W2PPZ6 126 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 NR5A2O00482 541 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 UPK3AO75631 287 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 SLC22A3O75751 556 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 OR4A8P0C604 315 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 CECR9P0C854 216 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 PRG2P13727 222 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 IDO1P14902 403 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 MVDP53602 400 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 TUBA1BP68363 451 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 TUBA4AP68366 448 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 MPP2Q14168 576 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 EFNB3Q15768 340 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 ADIPOQQ15848 244 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 PDCD4Q53EL6 469 aaKnown RBP19.7■□□□□ 0.74
SSBP4-203ENST00000593641 RPS26P11Q5JNZ5 115 aaPredicted RBP19.7■□□□□ 0.74
SSBP4-203ENST00000593641 CEP85LQ5SZL2 805 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 FAM120AOSQ5T036 256 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 ATG16L1Q676U5 607 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 ANKRD16Q6P6B7 361 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 TUBA1AQ71U36 451 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 EPHX4Q8IUS5 362 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 CLIP4Q8N3C7 705 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 OR4F15Q8NGB8 312 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 BCL2L2Q92843 193 aaPredicted RBP19.7■□□□□ 0.74
SSBP4-203ENST00000593641 TMEM19Q96HH6 336 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 FOXN4Q96NZ1 517 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 RAB1BQ9H0U4 201 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 RMND5AQ9H871 391 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 TPT1P8Q9HAU6 139 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 SLC6A13Q9NSD5 602 aa19.7■□□□□ 0.74
SSBP4-203ENST00000593641 CRNNQ9UBG3 495 aaPredicted RBP19.7■□□□□ 0.74
SSBP4-203ENST00000593641 IFT52Q9Y366 437 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms