RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RAB21Q9UL25 225 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 ZNF232Q9UNY5 417 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 CHST2Q9Y4C5 530 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 IGHV1-18A0A0C4DH31 117 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 TMEM247A6NEH6 219 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 ZNF587BE7ETH6 402 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 SLCO1B7G3V0H7 640 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 ZCCHC18P0CG32 403 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 C6orf10Q5SRN2 563 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 ATG16L1Q676U5 607 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 OR9I1Q8NGQ6 314 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 VPS33AQ96AX1 596 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 C3orf49Q96BT1 292 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 SLC25A36Q96CQ1 311 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 KCNK17Q96T54 332 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 SPATA9Q9BWV2 254 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 ZIM2Q9NZV7 527 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 PRDM4Q9UKN5 801 aa17.86■□□□□ 0.45
TRIM47-207ENST00000593089 FBN3Q75N90 2809 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 A0A0G2JPF8 293 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 TMEM229AB2RXF0 380 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 HNRNPCL2B2RXH8 293 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 HNRNPCL3B7ZW38 293 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 HNRNPCL1O60812 293 aaKnown RBP17.85■□□□□ 0.45
TRIM47-207ENST00000593089 VAMP5O95183 116 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 F12P00748 615 aaPredicted RBP17.85■□□□□ 0.45
TRIM47-207ENST00000593089 CSF3P09919 207 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 HNRNPCL4P0DMR1 293 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 POLR2JP52435 117 aaKnown RBP17.85■□□□□ 0.45
TRIM47-207ENST00000593089 UBE2NP61088 152 aaKnown RBP17.85■□□□□ 0.45
TRIM47-207ENST00000593089 ZSWIM7Q19AV6 140 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 SWI5Q1ZZU3 235 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 MST1LQ2TV78 715 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 ARFGEF3Q5TH69 2177 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 LINGO2Q7L985 606 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 MAVSQ7Z434 540 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 EPHX4Q8IUS5 362 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 PROX1Q92786 737 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 BOD1Q96IK1 185 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 SLC38A2Q96QD8 506 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 OR52B2Q96RD2 323 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 KCNS3Q9BQ31 491 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 ARMC7Q9H6L4 198 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 OBP2BQ9NPH6 170 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 RASD1Q9Y272 281 aa17.85■□□□□ 0.45
TRIM47-207ENST00000593089 A0A096LPI6 279 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 NR5A2O00482 541 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 UBDO15205 165 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 NPIPB7O75200 414 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 UPK3AO75631 287 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 AHSA1O95433 338 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 NUDT7P0C024 238 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 ZNF16P17020 682 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-207ENST00000593089 USF1P22415 310 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-207ENST00000593089 RPS5P46782 204 aaKnown RBP17.84■□□□□ 0.45
TRIM47-207ENST00000593089 TUBA1BP68363 451 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 TUBA4AP68366 448 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 HOXC5Q00444 222 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 ZNF311Q5JNZ3 666 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 CYB5R2Q6BCY4 276 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 MSANTD1Q6ZTZ1 278 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 TUBA1AQ71U36 451 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 PHC2Q8IXK0 858 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 KDM8Q8N371 416 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 STK35Q8TDR2 534 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 SORCS2Q96PQ0 1159 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 SDR39U1Q9NRG7 319 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-207ENST00000593089 THUMPD1Q9NXG2 353 aaKnown RBP17.84■□□□□ 0.45
TRIM47-207ENST00000593089 CDC42EP3Q9UKI2 254 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 IFT52Q9Y366 437 aa17.84■□□□□ 0.45
TRIM47-207ENST00000593089 A0A096LPE4 126 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 A0A1W2PPZ6 126 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 CRYAAP02489 173 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 FAM157CP0CG43 387 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 IGHV4-31P0DP07 118 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 PNMTP11086 282 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 PDLIM4P50479 330 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 SNRPD2P62316 118 aaKnown RBP17.83■□□□□ 0.44
TRIM47-207ENST00000593089 MFSD8Q8NHS3 518 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 BCL2L2Q92843 193 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-207ENST00000593089 MAL2Q969L2 176 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 BEX2Q9BXY8 128 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 FKBP7Q9Y680 259 aa17.83■□□□□ 0.44
TRIM47-207ENST00000593089 OR6C65A6NJZ3 312 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 FTCDNL1E5RQL4 147 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 GTF2E2P29084 291 aaKnown RBP17.82■□□□□ 0.44
TRIM47-207ENST00000593089 CLDN17P56750 224 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 LSM11P83369 360 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM47-207ENST00000593089 EGR4Q05215 589 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 GGTLC2Q14390 218 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 RGNQ15493 299 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 CARTPTQ16568 116 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 SLC2A7Q6PXP3 512 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 VHLLQ6RSH7 139 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 MIER2Q8N344 545 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 ANKS4BQ8N8V4 417 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 VRK1Q99986 396 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-207ENST00000593089 KATNB1Q9BVA0 655 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 PTDSS2Q9BVG9 487 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 CA10Q9NS85 328 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms