RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	MBNL1	Q9NR56	388 aa	Known RBP	13.28	□□□□□ -0.28
RFX2-222	ENST00000592546	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.28	□□□□□ -0.28
RFX2-222	ENST00000592546	ZNF879	B4DU55	563 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	PRSS44	E7EML9	344 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	GOSR2	O14653	212 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	PIN1P1	O15428	100 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	EMC8	O43402	210 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	ADAM11	O75078	769 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	RCBTB2	O95199	551 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	GYPB	P06028	91 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	CA3	P07451	260 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	C8orf89	P0DMQ9	161 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	WAS	P42768	502 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	ZNF136	P52737	540 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	HCCS	P53701	268 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	RPS15	P62841	145 aa	Known RBP	13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	SIRPA	P78324	504 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	TMEM69	Q5SWH9	247 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	STPG1	Q5TH74	334 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	PWWP2B	Q6NUJ5	590 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	NUP43	Q8NFH3	380 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	OR8K3	Q8NH51	312 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	C1orf216	Q8TAB5	229 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	SYNPR	Q8TBG9	265 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	S100A16	Q96FQ6	103 aa	Known RBP	13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	PDCD1LG2	Q9BQ51	273 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	XKR8	Q9H6D3	395 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	FANCF	Q9NPI8	374 aa		13.27	□□□□□ -0.28
RFX2-222	ENST00000592546	EIF4E2	O60573	245 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	MC3R	P41968	323 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	CLDN12	P56749	244 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	UBE2M	P61081	183 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	ZNF613	Q6PF04	617 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	ADAMTSL4	Q6UY14	1074 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	FRRS1	Q6ZNA5	592 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	MOB3C	Q70IA8	216 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	SUSD6	Q92537	303 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	TRMT61B	Q9BVS5	477 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	POT1	Q9NUX5	634 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	CLDND1	Q9NY35	253 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	TRBV2	A0A0J9YWF9	115 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	RIIAD1	A6NNX1	92 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	C5orf67	F2Z3F1	127 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	ZNF254	O75437	659 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	UBB	P0CG47	229 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	UBC	P0CG48	685 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	MGMT	P16455	207 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	CDK2	P24941	298 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	RPS27A	P62979	156 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	UBA52	P62987	128 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	POU4F2	Q12837	409 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	RBMS2	Q15434	407 aa	Known RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	MPPED2	Q15777	294 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	RPE65	Q16518	533 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	FAM74A1	Q5RGS3	127 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	RPL13AP3	Q6NVV1	102 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	SYS1	Q8N2H4	156 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	MUC20	Q8N307	709 aa	Predicted RBP	13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	OR13C2	Q8NGS9	318 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	SLC25A18	Q9H1K4	315 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	SIGLEC7	Q9Y286	467 aa		13.27	□□□□□ -0.29
RFX2-222	ENST00000592546	IGKV1-8	A0A0C4DH67	115 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	TMEM272	A0A1B0GTI8	110 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546		A0A1W2PR48	441 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	PQLC2L	A1A4F0	135 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ATG12	O94817	140 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	APOC1	P02654	83 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	CD1A	P06126	327 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	RAB40AL	P0C0E4	278 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	DRD3	P35462	400 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	RAB13	P51153	203 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	CLDN2	P57739	230 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	SORD	Q00796	357 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	C9orf50	Q5SZB4	431 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ELP2	Q6IA86	826 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	RPL22L1	Q6P5R6	122 aa	Known RBP	13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	TSSK4	Q6SA08	328 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ZNF836	Q6ZNA1	936 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	DNM1P46	Q6ZS02	220 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	RNF113B	Q8IZP6	322 aa	Known RBP	13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	TMEM239	Q8WW34	195 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	RAB40A	Q8WXH6	277 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	PHYHIP	Q92561	330 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	HAVCR1	Q96D42	359 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ASB16	Q96NS5	453 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	CCDC86	Q9H6F5	360 aa	Known RBP	13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	OR5V1	Q9UGF6	321 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ATG4B	Q9Y4P1	393 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	TRAPPC13	A5PLN9	417 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	LRIT2	A6NDA9	550 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	RASGRP1	O95267	797 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ZNF3	P17036	446 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ADH7	P40394	386 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	MNDA	P41218	407 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	FGL2	Q14314	439 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	SLC9A5	Q14940	896 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	ARHGAP19	Q14CB8	494 aa		13.26	□□□□□ -0.29
RFX2-222	ENST00000592546	LTB4R	Q15722	352 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms