RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 AGAP6Q5VW22 663 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 LEG1Q6P5S2 330 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 Q7L0L9 218 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 TPRA1Q86W33 373 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 MS4A15Q8N5U1 240 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 C10orf53Q8N6V4 93 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 LSM14AQ8ND56 463 aaKnown RBP14.34□□□□□ -0.11
MBD1-227ENST00000592060 OR13C5Q8NGS8 318 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 ZNF563Q8TA94 476 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 GHSRQ92847 366 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 KCTD12Q96CX2 325 aaKnown RBP14.34□□□□□ -0.11
MBD1-227ENST00000592060 SMIM19Q96E16 107 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 AGAP4Q96P64 663 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 UBL7Q96S82 380 aaPredicted RBP14.34□□□□□ -0.11
MBD1-227ENST00000592060 LPAR4Q99677 370 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 C11orf54Q9H0W9 315 aaPredicted RBP14.34□□□□□ -0.11
MBD1-227ENST00000592060 B3GAT2Q9NPZ5 323 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 WDR70Q9NW82 654 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 COPS7AQ9UBW8 275 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 MALT1Q9UDY8 824 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 ADAM30Q9UKF2 790 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 EXPH5Q8NEV8 1989 aa14.34□□□□□ -0.11
MBD1-227ENST00000592060 PLA2G10O15496 165 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 EIF4E2O60573 245 aaKnown RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 CD1AP06126 327 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 SDHAP31040 664 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 GBX2P52951 348 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 OR10A3P58181 314 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 ACSM3Q53FZ2 586 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 ALG10Q5BKT4 473 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 IDNKQ5T6J7 187 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 LYPD4Q6UWN0 246 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 SLC29A4Q7RTT9 530 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 MARCH3Q86UD3 253 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 UBQLNLQ8IYU4 475 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 RPS4Y2Q8TD47 263 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 SLC22A4Q9H015 551 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 CCDC86Q9H6F5 360 aaKnown RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 NPAP1Q9NZP6 1156 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 SEC16AO15027 2179 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 LINC00854A0A1B0GVQ3 168 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 A0A1W2PRG6 482 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 TOX3O15405 576 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 HCRTR2O43614 444 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 ABCD3P28288 659 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 EPHA8P29322 1005 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 ARRB1P49407 418 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 GDI2P50395 445 aaKnown RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 PNLIPRP2P54317 469 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 OR2B6P58173 313 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 CTXN1P60606 82 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 HSF2Q03933 536 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 RPL18Q07020 188 aaKnown RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 TOMM34Q15785 309 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 RHBDD2Q6NTF9 364 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 SFXN4Q6P4A7 337 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 TMEM71Q6P5X7 295 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 ZNF517Q6ZMY9 492 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 ZNF574Q6ZN55 896 aaPredicted RBP14.33□□□□□ -0.12
MBD1-227ENST00000592060 OR6K6Q8NGW6 343 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 TAAR8Q969N4 342 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 DEPDC7Q96QD5 511 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 TTYH2Q9BSA4 534 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 ALG12Q9BV10 488 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 TGIF2Q9GZN2 237 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 INIPQ9NRY2 104 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 SRPK3Q9UPE1 567 aa14.33□□□□□ -0.12
MBD1-227ENST00000592060 LY6G6EA0A0G2JKS1 128 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 ADAM10O14672 748 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 NDUFB5O43674 189 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 BGLAPP02818 100 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 ELK1P19419 428 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 RPS11P62280 158 aaKnown RBP eCLIP14.32□□□□□ -0.12
MBD1-227ENST00000592060 SIRPAP78324 504 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 IL18Q14116 193 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 RPL22L1Q6P5R6 122 aaKnown RBP14.32□□□□□ -0.12
MBD1-227ENST00000592060 JAZF1Q86VZ6 243 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 Q8N402 240 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 SNX33Q8WV41 574 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 RNF31Q96EP0 1072 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 FKRPQ9H9S5 495 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 RPRD1BQ9NQG5 326 aaKnown RBP14.32□□□□□ -0.12
MBD1-227ENST00000592060 ACOXLQ9NUZ1 547 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 GNG8Q9UK08 70 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 ATXN7L1Q9ULK2 861 aaPredicted RBP14.32□□□□□ -0.12
MBD1-227ENST00000592060 SIT1Q9Y3P8 196 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 U3KQA8 63 aa14.32□□□□□ -0.12
MBD1-227ENST00000592060 IGLV3-12A0A075B6K2 115 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 TRAV1-2A0A0B4J238 106 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 PRR32B1ATL7 298 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 FADS1O60427 444 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 CDC40O60508 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
MBD1-227ENST00000592060 SERPINA3P01011 423 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 SLC2A2P11168 524 aaPredicted RBP14.31□□□□□ -0.12
MBD1-227ENST00000592060 PNLIPP16233 465 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 FOXL2P58012 376 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 SQSTM1Q13501 440 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 EMC4Q5J8M3 183 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 ZNF684Q5T5D7 378 aa14.31□□□□□ -0.12
MBD1-227ENST00000592060 TRILQ7L0X0 811 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms