RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PTGR1Q14914 329 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 PCLAFQ15004 111 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 MAD2L1BPQ15013 274 aaPredicted RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 OTUD3Q5T2D3 398 aaPredicted RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 HHATQ5VTY9 493 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 UGT2A3Q6UWM9 527 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 EIF3MQ7L2H7 374 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 NUDCD3Q8IVD9 361 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 KRTCAP2Q8N6L1 136 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 POMGNT2Q8NAT1 580 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 OR51F2Q8NH61 342 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 OR5P2Q8WZ92 322 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 TLCD1Q96CP7 247 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 METTL2AQ96IZ6 378 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 MECRQ9BV79 373 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 MRPL37Q9BZE1 423 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF350Q9GZX5 532 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF275Q9NSD4 429 aaPredicted RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 MYEF2Q9P2K5 600 aaKnown RBP10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 OSGIN1Q9UJX0 560 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 TMED7Q9Y3B3 224 aa10.98□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM233B4DJY2 109 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 ANKRD28O15084 1053 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 SASH3O75995 380 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 C1QCP02747 245 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 BPGMP07738 259 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 ALDH3B1P43353 468 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 P2RY4P51582 365 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 NAA20P61599 178 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 HBA1P69905 142 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 SNTB2Q13425 540 aaKnown RBP10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 CEACAM7Q14002 265 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 TYW3Q6IPR3 259 aaKnown RBP10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 PAQR6Q6TCH4 344 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 C1QL2Q7Z5L3 287 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 GPAT4Q86UL3 456 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 LRP11Q86VZ4 500 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 LRRC17Q8N6Y2 441 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 RNF217Q8TC41 542 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 CNOT9Q92600 299 aaKnown RBP10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 MTERF3Q96E29 417 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF837Q96EG3 531 aaPredicted RBP10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 ATP6V1G3Q96LB4 118 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 JMJD8Q96S16 334 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 GATA5Q9BWX5 397 aaPredicted RBP10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 SUCNR1Q9BXA5 334 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 NOX3Q9HBY0 568 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 FBXO9Q9UK97 447 aaPredicted RBP10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 WNK1Q9H4A3 2382 aa10.97□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM120BA0PK00 339 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 PRAMEF27A3QJZ7 478 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF587BE7ETH6 402 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 EIF1BO60739 113 aaKnown RBP10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 STX11O75558 287 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 RP2O75695 350 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 KRT33AO76009 404 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 SEC14L2O76054 403 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 TFP02787 698 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 KRT16P08779 473 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 MATN1P21941 496 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 TACR3P29371 465 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 SOAT1P35610 550 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 HPCAL1P37235 193 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 ETV4P43268 484 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 CLK1P49759 484 aaKnown RBP10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 NPRL3Q12980 569 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 SCGB2A2Q13296 93 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 DAG1Q14118 895 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 OR7A5Q15622 319 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 ARHGAP11BQ3KRB8 267 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 AVPI1Q5T686 147 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 C1QTNF12Q5T7M4 302 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 C6orf120Q7Z4R8 191 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 R3HCC1LQ7Z5L2 792 aaKnown RBP10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 CLECL1Q8IZS7 167 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 SFXN5Q8TD22 340 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 RAB8BQ92930 207 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 PKNOX2Q96KN3 472 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 ANKRD27Q96NW4 1050 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 SYT3Q9BQG1 590 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 NAA11Q9BSU3 229 aaPredicted RBP10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 C1orf50Q9BV19 199 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 UNKLQ9H9P5 680 aaKnown RBP10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 ZNF446Q9NWS9 450 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 REV1Q9UBZ9 1251 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 ZDHHC2Q9UIJ5 367 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 FZR1Q9UM11 496 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 DNAJC15Q9Y5T4 150 aa10.96□□□□□ -0.65
PRKCSH-210ENST00000589990 TRAV20A0A0B4J274 112 aa10.95□□□□□ -0.66
PRKCSH-210ENST00000589990 LIPT2A6NK58 231 aa10.95□□□□□ -0.66
PRKCSH-210ENST00000589990 HMGB1P1B2RPK0 211 aaPredicted RBP10.95□□□□□ -0.66
PRKCSH-210ENST00000589990 AZIN1O14977 448 aa10.95□□□□□ -0.66
PRKCSH-210ENST00000589990 CFLARO15519 480 aa10.95□□□□□ -0.66
PRKCSH-210ENST00000589990 PPIHO43447 177 aaKnown RBP10.95□□□□□ -0.66
PRKCSH-210ENST00000589990 PLPP2O43688 288 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms