RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 VAMP5O95183 116 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 MPGP29372 298 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 TTKP33981 857 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 ACVR1BP36896 505 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 FADDQ13158 208 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 OR7A5Q15622 319 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 RPS26P11Q5JNZ5 115 aaPredicted RBP12.61□□□□□ -0.39
MBD1-220ENST00000589758 TSPO2Q5TGU0 170 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 PRAMEF8Q5VWM4 474 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 PRAMEF7Q5VXH5 474 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 TMEM225Q6GV28 225 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 AAED1Q7RTV5 226 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 ABHD12BQ7Z5M8 362 aaPredicted RBP12.61□□□□□ -0.39
MBD1-220ENST00000589758 FBXL14Q8N1E6 418 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 CADM2Q8N3J6 435 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 OR9K2Q8NGE7 335 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 TSPEARQ8WU66 669 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 MAL2Q969L2 176 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 SLC35B4Q969S0 331 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 TMEM19Q96HH6 336 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 REG4Q9BYZ8 158 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 BCL2L10Q9HD36 194 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 SLC17A5Q9NRA2 495 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 CBLN4Q9NTU7 201 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 TRBV5-3A0A0A0MS03 114 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 A0A1W2PR80 420 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 E7EQL1 145 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 CCDC22O60826 627 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 PPIBP23284 216 aaKnown RBP12.6□□□□□ -0.39
MBD1-220ENST00000589758 PAX7P23759 505 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 FOXG1P55316 489 aaPredicted RBP12.6□□□□□ -0.39
MBD1-220ENST00000589758 MTPNP58546 118 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 PRPS1P60891 318 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 RUNDC3AQ59EK9 446 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 ZNF311Q5JNZ3 666 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 GCNT6Q5T4J0 391 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 KLHL24Q6TFL4 600 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 DNM1P46Q6ZS02 220 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 C10orf111Q8N326 155 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 DPP10Q8N608 796 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 POU5F2Q8N7G0 328 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 WDR31Q8NA23 367 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 STK35Q8TDR2 534 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 BOD1Q96IK1 185 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 CPPED1Q9BRF8 314 aaPredicted RBP12.6□□□□□ -0.39
MBD1-220ENST00000589758 FKRPQ9H9S5 495 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 MRGBPQ9NV56 204 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
MBD1-220ENST00000589758 B3GALT5Q9Y2C3 310 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 CADP27708 2225 aa12.6□□□□□ -0.39
MBD1-220ENST00000589758 FN1P02751 2386 aaKnown RBP12.59□□□□□ -0.39
MBD1-220ENST00000589758 ABCA2Q9BZC7 2435 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 OR6C65A6NJZ3 312 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 MRASO14807 208 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 SNX3O60493 162 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 NDUFS7O75251 213 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 WNT11O96014 354 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 TP53P04637 393 aaPredicted RBP12.59□□□□□ -0.39
MBD1-220ENST00000589758 BMP2P12643 396 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 BMP4P12644 408 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 DSCR9P59020 149 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 DMTNQ08495 405 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 BNIP2Q12982 314 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 SELPLGQ14242 412 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 GPAT4Q86UL3 456 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 MUC15Q8N387 334 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 CLIP4Q8N3C7 705 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 ZIC4Q8N9L1 334 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 NFKBIDQ8NI38 313 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 BBS10Q8TAM1 723 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 C3orf49Q96BT1 292 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 ANKRD27Q96NW4 1050 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 ZNF385AQ96PM9 386 aaKnown RBP12.59□□□□□ -0.39
MBD1-220ENST00000589758 CGREF1Q99674 301 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 CACNG6Q9BXT2 260 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 A4GALTQ9NPC4 353 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 CORO2BQ9UQ03 480 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 RASD1Q9Y272 281 aa12.59□□□□□ -0.39
MBD1-220ENST00000589758 HIVEP2P31629 2446 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 FRS3O43559 492 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 TLX2O43763 284 aaPredicted RBP12.58□□□□□ -0.4
MBD1-220ENST00000589758 SSX4O60224 188 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 KRT33AO76009 404 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 AHSA1O95433 338 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 PRG2P13727 222 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 ETS2P15036 469 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 FABP6P51161 128 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 KRTAP1-1Q07627 177 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 SPOCK1Q08629 439 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms