RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 EIF4E1BA6NMX2 242 aaKnown RBP20.06■□□□□ 0.8
ATG4D-209ENST00000588857 BHLHE40O14503 412 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 GRK5P34947 590 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 RFC3P40938 356 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 SNRPGP62308 76 aaKnown RBP20.06■□□□□ 0.8
ATG4D-209ENST00000588857 OR7A5Q15622 319 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 SLC39A7Q92504 469 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 ZNF703Q9H7S9 590 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-209ENST00000588857 ZNF696Q9H7X3 374 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 CLN6Q9NWW5 311 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 MED12Q93074 2177 aa20.06■□□□□ 0.8
ATG4D-209ENST00000588857 TNRC6AQ8NDV7 1962 aaKnown RBP20.06■□□□□ 0.8
ATG4D-209ENST00000588857 TLX2O43763 284 aaPredicted RBP20.05■□□□□ 0.8
ATG4D-209ENST00000588857 PRKYO43930 277 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 WBP4O75554 376 aaKnown RBP20.05■□□□□ 0.8
ATG4D-209ENST00000588857 PPP1R3DO95685 299 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 OPN1LWP04000 364 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 GABRB1P18505 474 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 GRPRP30550 384 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 FMO3P31513 532 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 SFTPDP35247 375 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 AQP2P41181 271 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 TEKQ02763 1124 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 MYBPHQ13203 477 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 PMS2P3Q13401 168 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 TMEM176BQ3YBM2 270 aaPredicted RBP20.05■□□□□ 0.8
ATG4D-209ENST00000588857 KCTD21Q4G0X4 260 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 DPY19L2P2Q6ZN68 376 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.05■□□□□ 0.8
ATG4D-209ENST00000588857 ZADH2Q8N4Q0 377 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 BPIFB6Q8NFQ5 453 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 OR5J2Q8NH18 312 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 MOSPD2Q8NHP6 518 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 APH1BQ8WW43 257 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 OR5B2Q96R09 309 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 BLOC1S6Q9UL45 172 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 HDGFL3Q9Y3E1 203 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 CORINQ9Y5Q5 1042 aa20.05■□□□□ 0.8
ATG4D-209ENST00000588857 TRAV17A0A0B4J275 112 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 GJE1A6NN92 205 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 FAM166BA8MTA8 275 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 MCIDASD6RGH6 385 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 FTCDNL1E5RQL4 147 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SURF4O15260 269 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 OR6A2O95222 327 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 NOS3P29474 1203 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 UQCRC1P31930 480 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 CXCR4P61073 352 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 CSNK2BP67870 215 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 RPL18Q07020 188 aaKnown RBP20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SGCBQ16585 318 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 ALG10Q5BKT4 473 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 LAIR2Q6ISS4 152 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 IGFN1Q86VF2 1251 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 CCDC103Q8IW40 242 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 ZFP62Q8NB50 900 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-209ENST00000588857 Q96MT0 163 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SFXN2Q96NB2 322 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SCN3BQ9NY72 215 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SCOCQ9UIL1 159 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 PCDHGA9Q9Y5G4 932 aaKnown RBP20.04■□□□□ 0.8
ATG4D-209ENST00000588857 CSAG2Q9Y5P2 127 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 LIPT2A6NK58 231 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SLC1A7O00341 560 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 HPNP05981 417 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 MLLT10P55197 1068 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 B3GALT5-AS1P59052 145 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 RAC1P63000 192 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 WIPI1Q5MNZ9 446 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-209ENST00000588857 ARHGAP11AQ6P4F7 1023 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 BORAQ6PGQ7 559 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 SLC22A16Q86VW1 577 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 TMEM163Q8TC26 289 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 ERMAPQ96PL5 475 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-209ENST00000588857 ALKBH4Q9NXW9 302 aa20.04■□□□□ 0.8
ATG4D-209ENST00000588857 MRPL39Q9NYK5 338 aaKnown RBP20.04■□□□□ 0.8
ATG4D-209ENST00000588857 LOC400499M0QZD8 3231 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 M0R082 166 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 FAM20BO75063 409 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 GLSO94925 669 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-209ENST00000588857 TSPAN19P0C672 248 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 CCDC159P0C7I6 412 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 ADORA3P0DMS8 318 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 IMPDH2P12268 514 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 CRHBPP24387 322 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 PPIAP62937 165 aaKnown RBP20.03■□□□□ 0.8
ATG4D-209ENST00000588857 EFNB1P98172 346 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 SMN1Q16637 294 aaKnown RBP20.03■□□□□ 0.8
ATG4D-209ENST00000588857 HYAL4Q2M3T9 481 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 SLC35F1Q5T1Q4 408 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 FAM26EQ8N5C1 309 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 TMEM251Q8N6I4 163 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 SCAIQ8N9R8 606 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 FAM98AQ8NCA5 519 aaKnown RBP20.03■□□□□ 0.8
ATG4D-209ENST00000588857 ZNF417Q8TAU3 575 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 SMPDL3BQ92485 455 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 ZNF566Q969W8 418 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 GPX7Q96SL4 187 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-209ENST00000588857 ZNF587Q96SQ5 575 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-209ENST00000588857 SLC6A5Q9Y345 797 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms