RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ZC3H14Q6PJT7 736 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 DEF8Q6ZN54 512 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 REC114Q7Z4M0 266 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 ATCAYQ86WG3 371 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 PDZD9Q8IXQ8 264 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF595Q8IYB9 648 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 TMEFF1Q8IYR6 380 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 CLDN22Q8N7P3 220 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 DIRAS2Q96HU8 199 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 PRRC1Q96M27 445 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 VRK1Q99986 396 aaPredicted RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 CMSS1Q9BQ75 279 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 PDE7BQ9NP56 450 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 C14orf105Q9NVL8 296 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 ASH2LQ9UBL3 628 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 NPTNQ9Y639 398 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 TP53BP1Q12888 1972 aaPredicted RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 GOLGA4Q13439 2230 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 HYKKA2RU49 373 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 FITM1A5D6W6 292 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 CLCA1A8K7I4 914 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 CHST10O43529 356 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 NDUFB7P17568 137 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ELAVL4P26378 380 aaKnown RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 PTGER1P34995 402 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 GPR3P46089 330 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 GABRA4P48169 554 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 CSNK1EP49674 416 aaKnown RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 MAP4K2Q12851 820 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 SERTAD2Q14140 314 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 EIPR1Q53HC9 387 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF311Q5JNZ3 666 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 THEM4Q5T1C6 240 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 DDI2Q5TDH0 399 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TMEM17Q86X19 198 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 SLC34A3Q8N130 599 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF454Q8N9F8 522 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 KDF1Q8NAX2 398 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 AQP11Q8NBQ7 271 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 OR9Q2Q8NGE9 314 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 OR5T3Q8NGG3 340 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 OR9A4Q8NGU2 314 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 PHOSPHO1Q8TCT1 267 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ARHGDIGQ99819 225 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 SOSTQ9BQB4 213 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 OCSTAMPQ9BR26 566 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TMEM43Q9BTV4 400 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 MTHFD2LQ9H903 347 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ABCB9Q9NP78 766 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 C19orf12Q9NSK7 152 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 SOHLH2Q9NX45 425 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ATXN7L1Q9ULK2 861 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 A4GNTQ9UNA3 340 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 PCDHGA6Q9Y5G7 932 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TDRD6O60522 2096 aaKnown RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 EML5Q05BV3 1969 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TCRBV16S1A1N1A0A5B0 115 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF670-ZNF695F2Z2N8 137 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TCAPO15273 167 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 HCRTR1O43613 425 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 DUX1O43812 170 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 MPZL2O60487 215 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 DNAJB6O75190 326 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 THBS1P07996 1170 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 GUSBP08236 651 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 NT5EP21589 574 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 LCN1P31025 176 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 AVPR1BP47901 424 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ARRB1P49407 418 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 CASP6P55212 293 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 IGLV3-21P80748 117 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 MC2RQ01718 297 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 BIKQ13323 160 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 PRICKLE4Q2TBC4 344 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ACER2Q5QJU3 275 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 RBMS3Q6XE24 437 aaKnown RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 FRRS1Q6ZNA5 592 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 GLCCI1Q86VQ1 547 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 OR4N5Q8IXE1 308 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 SLC16A11Q8NCK7 471 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TMEM52Q8NDY8 209 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 MAFAQ8NHW3 353 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 APH1BQ8WW43 257 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ADAMTS14Q8WXS8 1223 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 HOXB13Q92826 284 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 ANKRD9Q96BM1 317 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 CTHRC1Q96CG8 243 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 OTUB1Q96FW1 271 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 SLC35A4Q96G79 324 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 C14orf144Q96I85 54 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TGM7Q96PF1 710 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 NIPSNAP1Q9BPW8 284 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 FUZQ9BT04 418 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 FNDC11Q9BVV2 318 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 TAPBPLQ9BX59 468 aa8.87□□□□□ -0.99
LINC01539-201ENST00000587904 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 RSPO3Q9BXY4 272 aaPredicted RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 POLR2J2Q9GZM3 115 aaKnown RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 POLR2J3Q9H1A7 115 aaKnown RBP8.87□□□□□ -0.99
LINC01539-201ENST00000587904 UNKLQ9H9P5 680 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms