RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 FBXO17Q96EF6 278 aa12.22□□□□□ -0.45
ATG4D-206ENST00000586863 THAP1Q9NVV9 213 aa12.22□□□□□ -0.45
ATG4D-206ENST00000586863 IGHV1-18A0A0C4DH31 117 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TRPC5OSA6NMA1 111 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 A8MVM7 634 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TMEM229AB2RXF0 380 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 NPIPB7O75200 414 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 WNT11O96014 354 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 IL6P05231 212 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TFPTP0C1Z6 253 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 FAM157CP0CG43 387 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 CRATP43155 626 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 CRISP3P54108 245 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 COPZ1P61923 177 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 CHRNB3Q05901 458 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 SWI5Q1ZZU3 235 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TBRG1Q3YBR2 411 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 SLC9B1Q4ZJI4 515 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 C1orf140Q5VVS0 124 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 PRAMEF8Q5VWM4 474 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 PRAMEF7Q5VXH5 474 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 NXNQ6DKJ4 435 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 CREB3L2Q70SY1 520 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 MAVSQ7Z434 540 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 SERPINA11Q86U17 422 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 EPHX4Q8IUS5 362 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 OR9I1Q8NGQ6 314 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 OR1K1Q8NGR3 316 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 C3orf49Q96BT1 292 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TMEM19Q96HH6 336 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 BOD1Q96IK1 185 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 SORCS2Q96PQ0 1159 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 PIF1Q9H611 641 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 TPT1P8Q9HAU6 139 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 CALML5Q9NZT1 146 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 PMF1-BGLAPU3KQ54 211 aa12.21□□□□□ -0.45
ATG4D-206ENST00000586863 FTCDNL1E5RQL4 147 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF587BE7ETH6 402 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 UPK3AO75631 287 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 SLC22A3O75751 556 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 KRT33AO76009 404 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 ANP32DO95626 131 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 CSF3P09919 207 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 ZCCHC18P0CG32 403 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 BMP4P12644 408 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 IDO1P14902 403 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
ATG4D-206ENST00000586863 TUBA1BP68363 451 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 TUBA4AP68366 448 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 LARS2Q15031 903 aaKnown RBP12.2□□□□□ -0.46
ATG4D-206ENST00000586863 C1QTNF12Q5T7M4 302 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 TMEM225Q6GV28 225 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 NIPAL3Q6P499 406 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 TUBA1AQ71U36 451 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 ABHD12BQ7Z5M8 362 aaPredicted RBP12.2□□□□□ -0.46
ATG4D-206ENST00000586863 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 PROX1Q92786 737 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 MAELQ96JY0 434 aaKnown RBP12.2□□□□□ -0.46
ATG4D-206ENST00000586863 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 KCNK17Q96T54 332 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 OBP2BQ9NPH6 170 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 INTS9Q9NV88 658 aaKnown RBP12.2□□□□□ -0.46
ATG4D-206ENST00000586863 TMEM45AQ9NWC5 275 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 ZIM2Q9NZV7 527 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 CDC42EP3Q9UKI2 254 aa12.2□□□□□ -0.46
ATG4D-206ENST00000586863 A0A096LPE4 126 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 A0A1W2PPZ6 126 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 SLCO1B7G3V0H7 640 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 NR5A2O00482 541 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 PHF1O43189 567 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-206ENST00000586863 VAMP5O95183 116 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 F12P00748 615 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-206ENST00000586863 NUDT7P0C024 238 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 USF1P22415 310 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-206ENST00000586863 HOXC5Q00444 222 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 EGR4Q05215 589 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 C6orf10Q5SRN2 563 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 KDM8Q8N371 416 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 BCL2L2Q92843 193 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-206ENST00000586863 ITCHQ96J02 903 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 OR52B2Q96RD2 323 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 PTDSS2Q9BVG9 487 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 SPATA9Q9BWV2 254 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 SDR39U1Q9NRG7 319 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-206ENST00000586863 CA10Q9NS85 328 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 RASD1Q9Y272 281 aa12.19□□□□□ -0.46
ATG4D-206ENST00000586863 A0A096LPI6 279 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 ARPC4-TTLL3A0A0A6YYG9 625 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 A0A0G2JPF8 293 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 VWC2LB2RUY7 222 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 HNRNPCL2B2RXH8 293 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 HNRNPCL3B7ZW38 293 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
ATG4D-206ENST00000586863 AHSA1O95433 338 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms