RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 BPGMP07738 259 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 GKN3PP0CG01 181 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 PRG2P13727 222 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 MAP2K6P52564 334 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 CHN2P52757 468 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 MAD2L1Q13257 205 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-225ENST00000586385 LRRC74BQ6ZQY2 392 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 CARM1Q86X55 608 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF781Q8N8C0 355 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 EIF1ADQ8N9N8 165 aaKnown RBP10.27□□□□□ -0.77
BRCA1-225ENST00000586385 OR4F15Q8NGB8 312 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 WDR60Q8WVS4 1066 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 CCDC115Q96NT0 180 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 DPY30Q9C005 99 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 ADPRHL2Q9NX46 363 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 SEC14L4Q9UDX3 406 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 CDHR4A6H8M9 788 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 FTCDNL1E5RQL4 147 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 WNT9BO14905 357 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 NUDT17P0C025 328 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 CBR1P16152 277 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 EGR1P18146 543 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 NPR2P20594 1047 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 IL12AP29459 219 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 CHI3L1P36222 383 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 SRP14P37108 136 aaKnown RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 MVDP53602 400 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 DVL1P1P54792 670 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 ARF1P84077 181 aaKnown RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 ROR2Q01974 943 aaKnown RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 EGR4Q05215 589 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 CCNIQ14094 377 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 FAM174BQ3ZCQ3 159 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 ANXA8L1Q5VT79 327 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 NIPAL3Q6P499 406 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF836Q6ZNA1 936 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 RINLQ6ZS11 566 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 SPATA21Q7Z572 469 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 ABHD12BQ7Z5M8 362 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 VRK2Q86Y07 508 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 KDM8Q8N371 416 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 CLIP4Q8N3C7 705 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 NEU4Q8WWR8 484 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 ZIM3Q96PE6 472 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 SORT1Q99523 831 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 KCNS3Q9BQ31 491 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 PTDSS2Q9BVG9 487 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 LINC00470Q9BZP3 86 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 MTHFD2LQ9H903 347 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-225ENST00000586385 NOX3Q9HBY0 568 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 SLC6A13Q9NSD5 602 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 B3GAT1Q9P2W7 334 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 LGALS13Q9UHV8 139 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 BTNL2Q9UIR0 455 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 MEGF8Q7Z7M0 2845 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 DSPPQ9NZW4 1301 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
BRCA1-225ENST00000586385 SH3PXD2BA1X283 911 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 A8MVM7 634 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 FAM157AC9JC47 383 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 KCNAB3O43448 404 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 SPRY1O43609 319 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-225ENST00000586385 TYROBPO43914 113 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 FZD7O75084 574 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 KRT33AO76009 404 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 ALDOCP09972 364 aaKnown RBP10.25□□□□□ -0.77
BRCA1-225ENST00000586385 HPCAP84074 193 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 ADRM1Q16186 407 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 GSTA3Q16772 222 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 C1orf140Q5VVS0 124 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 TMEM225Q6GV28 225 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 C12orf54Q6X4T0 127 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 DEF8Q6ZN54 512 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 WDFY1Q8IWB7 410 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 PNPT1Q8TCS8 783 aaKnown RBP10.25□□□□□ -0.77
BRCA1-225ENST00000586385 UBASH3BQ8TF42 649 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 CKAP2Q8WWK9 683 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF75AQ96N20 296 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF317Q96PQ6 595 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-225ENST00000586385 RSPO3Q9BXY4 272 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-225ENST00000586385 RACGAP1Q9H0H5 632 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 TPK1Q9H3S4 243 aa10.25□□□□□ -0.77
BRCA1-225ENST00000586385 CCDC154A6NI56 674 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 OR6C65A6NJZ3 312 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 E9PBE3 544 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 SEC14L2O76054 403 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 SNUPNO95149 360 aaKnown RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 GSNP06396 782 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 DBIP07108 87 aaKnown RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 ADRA2AP08913 450 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 TFPTP0C1Z6 253 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 PNMTP11086 282 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 IFNGR1P15260 489 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 IL7RP16871 459 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 CXCR1P25024 350 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms