RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 HRASLSQ9HDD0 168 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CD93Q9NPY3 652 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 POT1Q9NUX5 634 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RCE1Q9Y256 329 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF281Q9Y2X9 895 aa13□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ACOD1A6NK06 481 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GABARAPH6UMI1 98 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SHOXO15266 292 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HCRTR1O43613 425 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ITGA10O75578 1167 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PPM1BO75688 479 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ECDO95905 644 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TGM6O95932 706 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HNRNPA2B1P22626 353 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HES5Q5TA89 166 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR6K6Q8NGW6 343 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 BEX1Q9HBH7 125 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NANSQ9NR45 359 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DZANK1Q9NVP4 752 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NKIRAS2Q9NYR9 191 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CPNE7Q9UBL6 633 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EIF3KQ9UBQ5 218 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DTX4Q9Y2E6 619 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM221BA6H8Z2 402 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EFCAB7A8K855 629 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IDSB3KWA1 339 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 HRKO00198 91 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FOXS1O43638 330 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PRAF2O60831 178 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZFPL1O95159 310 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PSMB1P20618 241 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF81P51508 661 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NANOS3P60323 173 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RPS4XP62701 263 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SNTA1Q13424 505 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IL10RAQ13651 578 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TMEM255AQ5JRV8 349 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TOR2AQ5JU69 321 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF684Q5T5D7 378 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GPR139Q6DWJ6 353 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NPSR1Q6W5P4 371 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 EID2Q8N6I1 236 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR52I2Q8NH67 350 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RIT1Q92963 219 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RNF166Q96A37 237 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CCDC3Q9BQI4 270 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SPRTNQ9H040 489 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SLC25A18Q9H1K4 315 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MRPL15Q9P015 296 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF337Q9Y3M9 751 aa12.99□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NAP1L6A6NFF2 107 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 G3V3Q6 166 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 NDUFAF6Q330K2 333 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ELFN2Q5R3F8 820 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LINC01590Q5TEZ4 76 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FCRLAQ7L513 359 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SLC35F3Q8IY50 421 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SIX5Q8N196 739 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LINC00469Q8N7U9 141 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR2T35Q8NGX2 323 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LILRB1Q8NHL6 650 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RGP1Q92546 391 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GCDHQ92947 438 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RASD2Q96D21 266 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 LIN7BQ9HAP6 207 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GLTPQ9NZD2 209 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 KLHL9Q9P2J3 617 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FLVCR2Q9UPI3 526 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MEN1O00255 615 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GLCEO94923 617 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 MPC2O95563 127 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 KLF8O95600 359 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SELENOPP49908 381 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 AP3S2P59780 193 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PPP1CAP62136 330 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ERVK-25P63136 954 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 FAM109BQ6ICB4 259 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 ZNF433Q8N7K0 673 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 RBM18Q96H35 190 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SPACA7Q96KW9 195 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 GPX7Q96SL4 187 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 G6PC3Q9BUM1 346 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 DPCDQ9BVM2 203 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 CLEC4MQ9H2X3 399 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 IGFLR1Q9H665 355 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 V9GY05 133 aa12.98□□□□□ -0.33
CDK5RAP3-237ENST00000585163 A0A0C4DFX4 3053 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PRR32B1ATL7 298 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 TGFBR3LH3BV60 316 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 PSMD9O00233 223 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 SULT1B1O43704 296 aa12.97□□□□□ -0.33
CDK5RAP3-237ENST00000585163 OR7A10O76100 309 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms