RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 TRIM23P36406 574 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 PCBD1P61457 104 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 SLC35A2P78381 396 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 CDC20Q12834 499 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 OR4Q3Q8NH05 313 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 CHTF18Q8WVB6 975 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 CPNE4Q96A23 557 aaPredicted RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 GNB3P16520 340 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 HCCSP53701 268 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 MZT1Q08AG7 82 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 CCNJQ5T5M9 372 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 PRR18Q8N4B5 295 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 DAZAP1Q96EP5 407 aaKnown RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 TXN2Q99757 166 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 TIMM29Q9BSF4 260 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 APOOQ9BUR5 198 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 TMEM189-UBE2V1I3L0A0 370 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 IMPA1P29218 277 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 NEURL3Q96EH8 262 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 DUS3LQ96G46 650 aaKnown RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 SIDT1Q9NXL6 827 aaKnown RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 SGK494L7N484 410 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 LDB3O75112 727 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 DBHP09172 617 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 FURINP09958 794 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 CCL5P13501 91 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 NAGAP17050 411 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 RPS19P39019 145 aaKnown RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 CLDN12P56749 244 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 NANOGP1Q8N7R0 232 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 SUSD2Q9UGT4 822 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 ANKRD12Q6UB98 2062 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 ZDHHC11BP0C7U3 371 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 CCR6P51684 374 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 S100A7AQ86SG5 101 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 WDR76Q9H967 626 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 CCDC163A0A0D9SF12 145 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 KIR2DS5A0A0G2JLQ3 304 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 A0A0G2JNG1 304 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 A0A0U1RQS6 177 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 KIR2DS3K7RE56 304 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 KIR2DS5Q14953 304 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 EXOSC7Q15024 291 aaKnown RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 RPE65Q16518 533 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 PLCXD3Q63HM9 321 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 TTC9BQ8N6N2 239 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 C10orf90Q96M02 699 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 KATNB1Q9BVA0 655 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 NKX6-2Q9C056 277 aaPredicted RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 MUTYHQ9UIF7 546 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 VDAC3Q9Y277 283 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 A0A0A6YYC8 382 aaPredicted RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 TMEM72A0PK05 275 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 MBLAC1A4D2B0 266 aaPredicted RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 OR52A4PA6NMU1 304 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 PRSS44E7EML9 344 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 I3L1I5 382 aaPredicted RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 SPI1P17947 270 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 ZMAT1Q5H9K5 638 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 WDR5BQ86VZ2 330 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 OR2A12Q8NGT7 310 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 MED20Q9H944 212 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 PRAMEF27A3QJZ7 478 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 TRAPPC2LH3BP13 241 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 SMLR1H3BR10 107 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 TGM5O43548 720 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 SEMA4FO95754 770 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 HOXC13P31276 330 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 NDUFA6P56556 154 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 ERVFC1P60507 584 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 RPS15P62841 145 aaKnown RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 CATR1Q13166 79 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 HNRNPA1L2Q32P51 320 aaKnown RBP12.13□□□□□ -0.47
RNF43-208ENST00000584437 PRAMEF9Q5VWM5 478 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 SLC39A13Q96H72 371 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 SLC41A2Q96JW4 573 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 OR11A1Q9GZK7 315 aa12.13□□□□□ -0.47
RNF43-208ENST00000584437 KDM4EB2RXH2 506 aaPredicted RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 ADAMTS4O75173 837 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 AIFM1O95831 613 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 CST9LP1Q5W188 147 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 PRR22Q8IZ63 422 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ADGRF3Q8IZF5 1079 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 FRMD1Q8N878 549 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 NKAIN3Q8N8D7 197 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 OR52H1Q8NGJ2 320 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms