RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 LGI1O95970 557 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 P2RY4P51582 365 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 FOXG1P55316 489 aaPredicted RBP17.99■□□□□ 0.47
SS18-224ENST00000584083 NKX6-1P78426 367 aaPredicted RBP17.99■□□□□ 0.47
SS18-224ENST00000584083 DUSP7Q16829 419 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 RABL3Q5HYI8 236 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 COQ5Q5HYK3 327 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 CREB3L2Q70SY1 520 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 SSX8Q7RTT4 187 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 PCYOX1LQ8NBM8 494 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 OR52N5Q8NH56 324 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 TAAR8Q969N4 342 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 MCHR1Q99705 422 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 WFDC6Q9BQY6 131 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 CADP27708 2225 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 TRAV36DV7A0A075B6V5 113 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 KRT33AO76009 404 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 NPPAP01160 153 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 ITGA5P08648 1049 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 BSPH1Q075Z2 132 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 FOXD4Q12950 439 aaPredicted RBP17.98■□□□□ 0.47
SS18-224ENST00000584083 VMACQ2NL98 169 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 FAM69AQ5T7M9 428 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 OR7E24Q6IFN5 339 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 SEZ6L2Q6UXD5 910 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 KDM8Q8N371 416 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 POMGNT2Q8NAT1 580 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 GPR32P1Q8NGA4 272 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 OR8J3Q8NGG0 315 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 ARHGDIGQ99819 225 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 TMUB1Q9BVT8 246 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 SLCO5A1Q9H2Y9 848 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 GID8Q9NWU2 228 aa17.98■□□□□ 0.47
SS18-224ENST00000584083 IGKV1D-42A0A075B6H8 117 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 A0A087WUJ7 227 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 A0A0B4J2E0 115 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 A0A1B0GX12 115 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 DPRXA6NFQ7 191 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 FXYD1O00168 92 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 ARHGEF9O43307 516 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 TPST2O60704 377 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 C8BP07358 591 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 CBLP22681 906 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 GZMMP51124 257 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 CDH12P55289 794 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 IL1RL1Q01638 556 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 TGFBR3Q03167 851 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 GABRA6Q16445 453 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 NRF1Q16656 503 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 ZNF611Q8N823 705 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 VANGL1Q8TAA9 524 aaPredicted RBP17.97■□□□□ 0.47
SS18-224ENST00000584083 C10orf82Q8WW14 230 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 TAMM41Q96BW9 452 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 MUS81Q96NY9 551 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 ZNF317Q96PQ6 595 aaPredicted RBP17.97■□□□□ 0.47
SS18-224ENST00000584083 EPYCQ99645 322 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 HEATR1Q9H583 2144 aaKnown RBP17.97■□□□□ 0.47
SS18-224ENST00000584083 ARMCX1Q9P291 453 aa17.97■□□□□ 0.47
SS18-224ENST00000584083 A0A1W2PR80 420 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 M0R082 166 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 PDLIM1O00151 329 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 AIM2O14862 343 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 ZNF43P17038 809 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 CDH2P19022 906 aaPredicted RBP17.96■□□□□ 0.47
SS18-224ENST00000584083 PTNP21246 168 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 MPGP29372 298 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 GRPRP30550 384 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 HOXC12P31275 282 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 C1DQ13901 141 aaKnown RBP17.96■□□□□ 0.47
SS18-224ENST00000584083 SHEQ5VZ18 495 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 ADAM5Q6NVV9 412 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 NIPAL3Q6P499 406 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 ABHD12BQ7Z5M8 362 aaPredicted RBP17.96■□□□□ 0.47
SS18-224ENST00000584083 EPHX4Q8IUS5 362 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 C10orf53Q8N6V4 93 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 WFDC11Q8NEX6 87 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 OR6T1Q8NGN1 323 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 ZNF417Q8TAU3 575 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 TMEM171Q8WVE6 324 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 PERPQ96FX8 193 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 OXGR1Q96P68 337 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 ZNF587Q96SQ5 575 aaPredicted RBP17.96■□□□□ 0.47
SS18-224ENST00000584083 SEC14L4Q9UDX3 406 aa17.96■□□□□ 0.47
SS18-224ENST00000584083 CPSF4LA6NMK7 179 aaKnown RBP17.95■□□□□ 0.46
SS18-224ENST00000584083 SLC22A2O15244 555 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 FMO6PO60774 539 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 CD247P20963 164 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 SELENOPP49908 381 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 ZNF83P51522 516 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 CLDN17P56750 224 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 SWT1Q5T5J6 900 aaKnown RBP17.95■□□□□ 0.46
SS18-224ENST00000584083 ZNF613Q6PF04 617 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 KLHL17Q6TDP4 642 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 H1FNTQ75WM6 255 aaPredicted RBP17.95■□□□□ 0.46
SS18-224ENST00000584083 CCDC80Q76M96 950 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 CALHM3Q86XJ0 350 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 LRRC75A-AS1Q8N1F1 130 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 POU5F2Q8N7G0 328 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 C1orf162Q8NEQ5 155 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms